| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_0683 |
|---|
| Symbol | |
|---|
| ID | 8881867 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 718494 |
|---|
| End bp | 720227 |
|---|
| Gene Length | 1734 bp |
|---|
| Protein Length | 577 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | Glyoxalase/bleomycin resistance protein/dioxygenase |
|---|
| Protein accession | YP_003509489 |
|---|
| Protein GI | 291298211 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0400533 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.111601 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCGGC GCAACCGGCC GCGACGCCGA GGCGCGCGCG GCGGGGTCGG CGGCGGATTC
GGCAACCTGA AGAACTTCGG GGGGTCCCGG GCCGCCGGTG TCCTGACTTT ACTGGTTCTC
TCGCTCTTCA CCGGCGCCAT CGCCCTTGGC GCCCAGAGCA TCGCGGCCGC GGTGATCGCG
TTCCTGTTCT TCGCCGGTGC GCTGGCGGTG GTGACGGCGG CGCGGGCGCG CTACCACTTC
ATCCAGGAGC CCGTCGAGAC CGAGGTCCCG CTGGAGAAGG TCGCCGAGTT CCACATCGAC
GACCTGAAGA CCGAGGACGA ACCGGCCGAC GACGAGGTCA ACTCGCTGGC CGACCTGGAG
CGCAGCTTCG CGCACGACAG CGAGAAGGAC GCCGAGTCGA AGGCCCCGTC CGCCGCCGTG
TCGGCGAAGG CCGCCGAGGT CAAGGCGCCG TCCAAGGACA CCGTGACCGT TGTGGTGCCG
CAGAAGCAGC GCGACGAGGC GGCCGACGAC AAGGCCGATG AGCCGGACGC GGCCGCCGCC
GGGCCGGTCG AGACCGCACC GGCAGAGACC GAGTCGTCCG AGGCCGCGTC CGAACCCGAA
CCGGTCGCCG AGGCCGGGCT GGACGAGGTG AAGGCCGAGA CCACCGAGTC CGGACCCGTG
GCGACCGAAG CCGTCGTGGC CGAGGCACCC GAGGACGATC CGCCGATCGC CGCCGAGGTC
GCCCGCGAGA CACTGCTGGC GCAGGCGTCG GCACGGGACA CCGTCCCCGC CGATCCGCCG
CGCACCACGG AACCGGAGTC CGAAGCACCC GAGTCCGACG ACCTGGACGA CGAAGACGAA
GACGAAGAGG ATTCCGACGC CTCGGTCGAG GTACCGGCTC CCCGGGAACC CAGCGACGAG
GACGAGCCGG TCGCCCTCGA CGACGACTTC GACGACATCG ACGCGTTGAT GGCGCCGCTG
TTCGACGAGG AGGACGACCC GGAACCGGTG CCGTCCCAGC AATCCGAGAC TCCCGGAACC
GCGTTGAGCC TGCTGGCCGC CGAGACGCCG GGCACCGTGG CGCACTACGG GGGCGCCTCG
TCGCTGCCGC CCGAGGCGGT GCGGGACGTG GCCGCGACCC TGATCGTCGC GGACCTGCCG
CGGTCGGTCA TGTTCTACAC CGAGCTGCTG GGCCTGGTGG AGATCGACCG GGCTCCCGAC
GCGGTGCTGC TGGAGGCGGG TTTCGGCCGG GTGCTGCTGT GGCGCCGCGA CGACGCGCCC
GGCGCCGGTG ACCCGGTGAT GCACCTGACC TTCGAGGTCG GCGACATCGA CGCGGCCTAC
GAATCCATGC GCGCCAAGGG GATCGAGTTC ATCCACCCGC CCCGGGCGGC GCTGTCGGGC
GAGGTGCACA ACCTGCGGGC CGCGTCCTTC CTGGACCCGG ACGGCCACGG ACTGGCGATC
ACGGAATTGC GCGAGCATTC GTCGCGTCGT TTAATTCCGT GCGCTGACAA ATCGGAATTA
CCGGCGATTT CCCGCAATTC GTCGGCCTTA TTCGCCGACC GTTTTCCGGA TAGGCTGAAG
GCATGCGAAT GTGCTGCCGA ATTCTGTCCC TCATTGTCAT CGGCGGACTT TTCATCGCCA
TTCCGACAAA TCCGGTTTAT GCGAAGAGCT GTAAAAGCGA AGCCGGGCAC TCGCCGTGGG
AGGGCACGCC GTGGTCGCAG GAGAGAATGG ACGTCGGCCG CGTCGACGCA TTGA
|
|---|
| Protein sequence | MDRRNRPRRR GARGGVGGGF GNLKNFGGSR AAGVLTLLVL SLFTGAIALG AQSIAAAVIA
FLFFAGALAV VTAARARYHF IQEPVETEVP LEKVAEFHID DLKTEDEPAD DEVNSLADLE
RSFAHDSEKD AESKAPSAAV SAKAAEVKAP SKDTVTVVVP QKQRDEAADD KADEPDAAAA
GPVETAPAET ESSEAASEPE PVAEAGLDEV KAETTESGPV ATEAVVAEAP EDDPPIAAEV
ARETLLAQAS ARDTVPADPP RTTEPESEAP ESDDLDDEDE DEEDSDASVE VPAPREPSDE
DEPVALDDDF DDIDALMAPL FDEEDDPEPV PSQQSETPGT ALSLLAAETP GTVAHYGGAS
SLPPEAVRDV AATLIVADLP RSVMFYTELL GLVEIDRAPD AVLLEAGFGR VLLWRRDDAP
GAGDPVMHLT FEVGDIDAAY ESMRAKGIEF IHPPRAALSG EVHNLRAASF LDPDGHGLAI
TELREHSSRR LIPCADKSEL PAISRNSSAL FADRFPDRLK ACECAAEFCP SLSSADFSSP
FRQIRFMRRA VKAKPGTRRG RARRGRRREW TSAASTH
|
|---|
| |