| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_0659 |
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| Symbol | |
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| ID | 8881843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 691790 |
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| End bp | 693661 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | thiamine pyrophosphate protein central region |
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| Protein accession | YP_003509465 |
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| Protein GI | 291298187 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.101601 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCACGA TCCGGCTCAC CACCGGCCAG GCGCTGGTGC GGTTCCTGGC GAACCAGTGG
AGCGAACGCG ACGGGCAGAC GCACCGGCTG TTCGCCGGTT GCTTCGGGAT CTTCGGCCAC
GGCAACGTCG CCGGGTTCGG GCAGGCGCTG TTGCAGGACG GCAAGGACCT GGAGCTGCCG
TACTACCTGG CCCGCAACGA ACAGGGCATG GTCCACAGTG CGGTCGCGTT CGCGCGGCTG
CGGGACCGGA TGTCCACCTT CGCGTGCACC GCCTCGATCG GCCCCGGCTC CACGAACATG
GTGACCGGCG CGGCGCTGGC GACCATCAAC CGGCTGCCGG TGTTGTTGCT GCCCAGCGAC
TACTTCGCCA ACCGCTTCCC CGACCCGGTG CTGCAACAGC TGGAGGATCC GCACAGCCGC
GACACCTCCG TCAACGACGC CTTCCGTCCG GTTTCGCGGT ACTGGGACCG GATCCAGCGC
CCCGAGCAGC TGATGTCGGC GGCGTTGACG GCGGCCCGGG TGCTGACCGA CCCGGCCGAG
ACCGGCGCGG TCACGCTGTG CCTGCCGCAG GACGTGCAGG CCGAGGCGTA CGACTGGCCG
CAGGAGTTCT TCGTGCCCCG GGTGTGGCCG GTGGCGCGTC CGGTGCCGGA ACCGGCGGCG
CTGGCGCGGG CGGTGGAGTG CCTGACCGCG GCGCGGCGGC CGCTGATCGT GGCCGGTGGC
GGCGTGAAGT ACTCGCTGGC CACCGACGCG TTGCGCGCGT TCGCCGCCGC GACCGGGACA
CCCGTGGCCG AGACCCACGC GGGCAAGGGA TCGGTGCCGT GGACCCAGCC CTCGGCGGTG
GGCGGCATCG GCGCCACCGG TTCGGCCGCC GCCAACATGC TGGCCGCCGA GGCGGACGTG
GTGCTGGGTG TCGGCACCCG CTACAGCGAC TTCACCACCG CCTCCCACAG CCTGTTCGCC
GATCCCCGGG TGCGGTTCGT CAACCTCAAC GTGGCGGCCA TGGACACGGT GAAACTCGGC
GGGGTGTCCA TCGTGGCCGA CGCTCGCGCG GGACTGGAGG CGCTGTCCAC GGCCGTCGGC
ACCTGGAAGG CCGATCCGGA CTGGACGGAC CGGGCGCGGC GGCTGGCGGG CGACTGGCGA
CGCGCCACCG ACGCCGCCTA CCACCTCGAC CACGGCCCGC TGCCCGCGCA GACGGCGGTG
CTGGGCGCCC TCAACGACGC CGTCGGACAC CGCGACGTCG TCATCAACGC CGCCGGGAGC
ATGCCCGGTG ACCTGCACAA GCTGTGGCGC GCATCCGATC CGAAGCAGTA CCACGTCGAG
TACGGGTACT CATGCATGGG CTACGAGATC GCCGCCGGGG TGGGCGCGAA ACTGGCCGAC
CCGACCCGGG AGGTGTACGT CCTGGTCGGC GACGGCTCCT ACCTGATGAT GGCCTCCGAG
CTGGTGACCG CGGTGTCGGA ACGGCTGAAA CTCATCGTGG TGCTGGTCGA CAACGGCGGC
TTCGCCTCCA TCGGCGGACT GTCGCAATCG GTCGGTTCGC AGCGGTTCGG CACCAGCTAC
CGGCACCGCG ACGCCGCCAC CGGCGAACTG GACGGCGATC CACTGCCGGT CGACCTGGGC
GCCAACGCCG CCAGCCTCGG CGCCACCCTG ATCCGCGCCG ACTCGATCGG CGAGTTCGCG
CTGGCGTTGT CCCGCGCGAA GCACAACGAC GGGGTCACGG TCGTGCACAT CCGCACCGAC
CCGCTGGCGC CCTCGGCGCC GTCCACCGCC TGGTGGGACG TGCCGGTCGC CGAGGTCGCC
GAACTGGACA CCACTCGAAA GGCCCGCACC GAGTACGAGG CCGCCGTCAA GCGGCAACGC
CATTACCTGT GA
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| Protein sequence | MGTIRLTTGQ ALVRFLANQW SERDGQTHRL FAGCFGIFGH GNVAGFGQAL LQDGKDLELP
YYLARNEQGM VHSAVAFARL RDRMSTFACT ASIGPGSTNM VTGAALATIN RLPVLLLPSD
YFANRFPDPV LQQLEDPHSR DTSVNDAFRP VSRYWDRIQR PEQLMSAALT AARVLTDPAE
TGAVTLCLPQ DVQAEAYDWP QEFFVPRVWP VARPVPEPAA LARAVECLTA ARRPLIVAGG
GVKYSLATDA LRAFAAATGT PVAETHAGKG SVPWTQPSAV GGIGATGSAA ANMLAAEADV
VLGVGTRYSD FTTASHSLFA DPRVRFVNLN VAAMDTVKLG GVSIVADARA GLEALSTAVG
TWKADPDWTD RARRLAGDWR RATDAAYHLD HGPLPAQTAV LGALNDAVGH RDVVINAAGS
MPGDLHKLWR ASDPKQYHVE YGYSCMGYEI AAGVGAKLAD PTREVYVLVG DGSYLMMASE
LVTAVSERLK LIVVLVDNGG FASIGGLSQS VGSQRFGTSY RHRDAATGEL DGDPLPVDLG
ANAASLGATL IRADSIGEFA LALSRAKHND GVTVVHIRTD PLAPSAPSTA WWDVPVAEVA
ELDTTRKART EYEAAVKRQR HYL
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