Gene Snas_0657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0657 
Symbol 
ID8881841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp689361 
End bp690272 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content69% 
IMG OID 
ProductMyo-inosose-2 dehydratase 
Protein accessionYP_003509463 
Protein GI291298185 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.700284 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCGA CACTGCGACT CGGTTCGGCC CCCGACTCCT GGGGCGTGTG GTTCCCCGAC 
GACGAACGGC AGCTGCCGTG GCAGCGGTTC CTCGACGAAC TCGCCGGTGC CGGTTACGAG
TGGCTGGAAC TGGGCCCGTA CGGCTACCTG CCCACCGACG CGGCGCGACT GTCCGACGAG
GTCGCCTCCC GGGGTCTGAG GGTCAGCGGT GGCACCGTCT TCGGTGCGCT GCACCGGGAG
TCCGAATGGG ACTCGATGCT GGCCACCACC CGCAAGGTCG CGGCCCTGAC CGCCGCGCTT
GGCGCCAAAC ACCTGGTGTA CATCCCGCCG CTGTACCGCG ACGAGAAGAC CGGCGGCTTC
CTGGAGTCAC CACAGTGGAC GTCCTACGAC TGGGCCACCA CGATGCGGGC CGCCAACCGG
CTGGGCCGGA TCCTGCTCGA CGAGTACGGG GTGCGGCTGT GCCTGCATCC GCACGCCGAC
ACCCACATCC AGACCCAGCC GCAGATCGAG CGGTTCCTGG ACGGCACCGA CCCCGAGGCG
GTGTCGCTGT GCCTGGACAC CGGGCACGTC GCCTACGGCG GCGGTGACAA CCTCGACCTG
ATCCGCCGGT TCTCCGAACG CATCGGCTAC GTCCACATCA AACAGATGGA CCCCGAGATC
CTGGCCGCCG TCGCCGCCGA GGACCTGTCC TTCGGCGAGG CCGTCAAACG CGGCGTCTGC
GTCGAACCAC CCGCCGGGGT GCCCAACCCG GCCACCATCG TGGAGGAACT GTCCGGTCTG
GACGCCGAAC TGTTCGTCAT CGTCGAACAG GACCTCTACC CCTGCGAACC CGAGGTGCCG
CTGCCCATCG CGGTCCGCAC CCGCGACTAC CTGCGCGGCT GCGGACTCGG CGCCAGTCAC
CAGAAAACCT GA
 
Protein sequence
MAATLRLGSA PDSWGVWFPD DERQLPWQRF LDELAGAGYE WLELGPYGYL PTDAARLSDE 
VASRGLRVSG GTVFGALHRE SEWDSMLATT RKVAALTAAL GAKHLVYIPP LYRDEKTGGF
LESPQWTSYD WATTMRAANR LGRILLDEYG VRLCLHPHAD THIQTQPQIE RFLDGTDPEA
VSLCLDTGHV AYGGGDNLDL IRRFSERIGY VHIKQMDPEI LAAVAAEDLS FGEAVKRGVC
VEPPAGVPNP ATIVEELSGL DAELFVIVEQ DLYPCEPEVP LPIAVRTRDY LRGCGLGASH
QKT