Gene Snas_0647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0647 
Symbol 
ID8881831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp680881 
End bp681768 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content64% 
IMG OID 
ProductSecreted repeat of unknown function 
Protein accessionYP_003509453 
Protein GI291298175 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.824327 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACT CACTGCTGAG GCGTCTGGCC CTGCCCGCGG TCATCGCGGC ACTGGCGATT 
CCGGCGCTGG CCGCGTGCAA TTCCGCCGGT GCCAACGAGA GCACCGGCAA GGAGGCCGCC
GACTCGGCCA CCGAGGTCAA GGTCGGCGAG ACCAGCCTGG GCGACGTCCT GCTGGACTCG
GAGGGCAAAA CCCTCTACAT GTTCAAGAAG GACAAGGACG GCAAGTCCGC CTGTTACGAC
AAGTGCGAGA AGATGTGGCC GCCGTTGACG GTGGACGGGG ACGCCAAGGC CGGTGACGGC
GCCGACGCGG ATCTGTTGGG CACCAGCGAA CGCGAGGACG GTTCGCAGCA GGTCACCTAC
AACGGCATGC CGCTGTACTA CTTCGCCAAG GACAAGGCCG AGGGCGACGT GAACGGCCAG
GGCGTCAAGG ACGTCTGGTA CGTCGTGGAC GCCGAGGGCA ACATCGTCGA CAAGGCCAAG
GACTCCGGTG GCGACGACGG CTACGACGAC GGGGAAGAGA AGAAGAGCTA CGACCTGCAG
CTGGTCGACA ACGACGAATA CGGCCCGATC CTGGTCAACT CCGAGGGCAT GACGCTGTAC
ATGTTCTTCA AGGACGAGAA GCTCGACAAC GCCTCCGCCT GCTACAAGGA CTGCCTGAAC
AAGTGGACTC CGCTGACCGT CGAGGACGAC CCGACCTACG GCGACGGCGT CGACAAGTCC
CTGATCGGCA CCATCGAGCG TGAGGACGGC ACCAAGCAGG TCACCTACAA CGACTGGCCG
ATGTACACCT TCAACGACGA CGCCAACGCC GGTGACACCA AGGGCGTCGG CTTCAAGGAC
CTGTGGTGCG CCACCACCGC CACCGGCGAG GCGGCCGTCA CCAAATAA
 
Protein sequence
MSNSLLRRLA LPAVIAALAI PALAACNSAG ANESTGKEAA DSATEVKVGE TSLGDVLLDS 
EGKTLYMFKK DKDGKSACYD KCEKMWPPLT VDGDAKAGDG ADADLLGTSE REDGSQQVTY
NGMPLYYFAK DKAEGDVNGQ GVKDVWYVVD AEGNIVDKAK DSGGDDGYDD GEEKKSYDLQ
LVDNDEYGPI LVNSEGMTLY MFFKDEKLDN ASACYKDCLN KWTPLTVEDD PTYGDGVDKS
LIGTIEREDG TKQVTYNDWP MYTFNDDANA GDTKGVGFKD LWCATTATGE AAVTK