Gene Snas_0646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0646 
Symbol 
ID8881830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp679539 
End bp680681 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content72% 
IMG OID 
Producthistidine kinase 
Protein accessionYP_003509452 
Protein GI291298174 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.411945 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTCT CTCGACCCCC GCGACAGCCG CTTGTGGACG CGGTTGTCGT CGCCGTTGCC 
GCGGCGCTGG TTGTCGTGGA CGGCGCGCTG GCGGCCTCGG ACGCCGGACG GGTCGAGCCC
GCGGGAGCCG CGCTGCTGGC CTCGGCGCTG TCCCTCGCGC TGTGGCGGCG TTTCCCCCGG
CTGGTGCTGA TCGGGGCGCT GGCCGCCGTG GCCGTCTACA GCCAGTTCAA CACCATGTCG
ATGCTGGGCA GCGTCCCGTT GCTGGCGGCG GTGTTCAACA GCATGCGGCT GGGACACCGG
TGGTTCTCCG TCACCCTCGT CGCCCCCGTC ATCGTCGTCC TGACGACCAT CAACCTCATC
GAGGAACCCG ACCGGCCGCT GCGCTCGCTG CCGGAGGCGT CGGGCATCCC GCTGGGCTGG
GTGGTGGCGG CCGGGGTGCT CGGTGAGGTG TTCCGGCAGT ACCGCGCCTA CGTCGACCAG
GCCGAACAGC GCGCCATCGA GGCCGAACGC GGCCGCGAGG AGATGGCGCT GCGCCGCGCG
GGCGAGGAAC GGCTGCGCAT CGCCCGGGAA CTACACGACT CGCTGACCCA CGCGATCTCG
GTCATCAAGA TGCAGTCCAG CGTCGCGGTC CACCTGGCAG CCAAACAGGG ACAGCGCCCC
TCCGAAGCAC TCACCGCGAT CCAGCAGGCC AGCATCGAGG CCAACCGGGA ACTGCGCTCC
ACCCTGAAGG TGCTGCGCGA CGACCAGCCG CCGGAGCCCG GACTGCACCG GCTCAGCGAA
CTGGTGGAAC AGATCCGGCT GGCGGGAGTA CGCGCGACGG TAACCGTCGA GGGCGAACGC
GGCGCCGTAC CCACCGAAGT GGACTGGACC GCGTTCCGCA TCGTCCAGGA GTCACTGACC
AATGTGGCCC GGCACGCCGG GGCCGAGACC GCCCAGGTCC TGCTGCGCTA CTCGCCCGGC
GCCCTGGAGG TCAACGTCAC CGACGACGGC CGCGCCGACC CGTCCATGCC CCCGGTGCCC
GGCGTCGGGC TGACCGGCAT GAACGAACGC GTCGCGGGCA TCGGCGGCCG ACTGCGGGCC
GGTCCCAAAC CCGGCGGCGG CTTCGCGGTC TCCGCCGTCC TGCCACTGGG GACGGTGCGA
TGA
 
Protein sequence
MELSRPPRQP LVDAVVVAVA AALVVVDGAL AASDAGRVEP AGAALLASAL SLALWRRFPR 
LVLIGALAAV AVYSQFNTMS MLGSVPLLAA VFNSMRLGHR WFSVTLVAPV IVVLTTINLI
EEPDRPLRSL PEASGIPLGW VVAAGVLGEV FRQYRAYVDQ AEQRAIEAER GREEMALRRA
GEERLRIARE LHDSLTHAIS VIKMQSSVAV HLAAKQGQRP SEALTAIQQA SIEANRELRS
TLKVLRDDQP PEPGLHRLSE LVEQIRLAGV RATVTVEGER GAVPTEVDWT AFRIVQESLT
NVARHAGAET AQVLLRYSPG ALEVNVTDDG RADPSMPPVP GVGLTGMNER VAGIGGRLRA
GPKPGGGFAV SAVLPLGTVR