Gene Snas_0620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0620 
Symbol 
ID8881804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp656140 
End bp657186 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content68% 
IMG OID 
Productoligopeptide/dipeptide ABC transporter ATPase subunit 
Protein accessionYP_003509427 
Protein GI291298149 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGACG AACCCATCCT GTCGGTCCGC GACCTGGAGA TCAGCTACCG CACCGGGAAA 
CGCACCGAGG TGACCGCCGC GTCCGACATC AACTTCGACC TGTACCCGGG CGAGTCGATG
GCGCTGGTCG GCGAGTCCGG TTGCGGCAAG ACGACACTGG GGCTCGGGCT GCTGAAGCTG
CTGCCCCGGC TGGGCCGGGT GCCGCGCGGC ACCGTCACCT ACCGCCGCAA GGACGGCAGC
CGCTCCGACA TCATGAAGCT CGGCAAGGAG GAGCTGCGCA GGTTCCGCTG GAGCGAGGCG
GCGATGGTGT TCCAGGGCGC CATGAACGCC TTCAATCCGG TGCAGCGCAT CGCCGACCAC
TTCGAGGACA CGCTGCGCGA CCACGCCAAC GGTCAGAAGC GCTGGAGTAC GGCCGACATC
AAGAGGCGCT CCGAGGAACT GCTGGACCTG GTGCGGCTGG AACCCGACCG GGTGCTGCGC
AGCTACCCGC ACGAACTGTC CGGCGGCATG AAGCAGCGCA CCCTGATCGC GCTGGCACTG
GCCCTGGAGC CGCAACTGCT GGTGCTGGAC GAACCCACCA CGGCACTGGA CCTGCTGACA
CAGCGCTCCA TCGTGGAACA GCTGCACGAG CTGCGGGAAC GGCTGGGCTT CTCGATGATC
TTCATAACCC ATGATCTCGG CCTGGCCGCC GAACTGGCCG ACCGGGTGTC CACCATGTAC
GCCGGACGGA TCATCGAGTC CGGCACCGCC GAGGACATCT TCTACAACCC GCGCCACCCC
TACACGGCCG GACTCATCAA GGCGGTGCTG CCGGTCGCCG GTGACCTGCC GGAACTGGAG
TCGATCCCCG GCACGCCACC GAACCTGGCG AACCTGCCGC CCGGCTGCGC CTTCGCGCCG
CGCTGCGGCT ACGCCACATC CGAGTGCTCC GACGAGATCC CGGCGCTGAC CCGCATCGAG
GGCTCCAACG GCAACCCGCC GCACACCGCG GCCTGCCTGC ACAGCGACCA GGTCGAATTC
TCCCGACAGG TGGTGTCCCG TGTCTGA
 
Protein sequence
MNDEPILSVR DLEISYRTGK RTEVTAASDI NFDLYPGESM ALVGESGCGK TTLGLGLLKL 
LPRLGRVPRG TVTYRRKDGS RSDIMKLGKE ELRRFRWSEA AMVFQGAMNA FNPVQRIADH
FEDTLRDHAN GQKRWSTADI KRRSEELLDL VRLEPDRVLR SYPHELSGGM KQRTLIALAL
ALEPQLLVLD EPTTALDLLT QRSIVEQLHE LRERLGFSMI FITHDLGLAA ELADRVSTMY
AGRIIESGTA EDIFYNPRHP YTAGLIKAVL PVAGDLPELE SIPGTPPNLA NLPPGCAFAP
RCGYATSECS DEIPALTRIE GSNGNPPHTA ACLHSDQVEF SRQVVSRV