Gene Snas_0605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0605 
Symbol 
ID8881789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp639983 
End bp640870 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content68% 
IMG OID 
Productsuccinyl-CoA synthetase subunit alpha 
Protein accessionYP_003509412 
Protein GI291298134 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.25955 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATCT TCCTCAACGA GAACTCCAAG ATCATCGTCC AGGGCATGAC CGGTGCCGAG 
GGCACCAAGC ACACCCGGCG GATGCTGGCC TCCGGCGCCA ACGTCGTCGG CGGCGTCAAC
CCGCGCAAGG CCGGTTCCAA GGTCGACTTC GACGGCACCG AACTGCCGGT GTTCGCCACC
GTCGCCGAGG CGATGACCGA GACCGGCGCC GACACCACCG TGGTGTTCGT GCCGCCGAAG
TTCGCCAAGG ACGCGGTGCT GGAAGCCGTG AACGCCGAGA TCGGGCTGTG CGTCGTCATC
ACCGAGGGCA TCCCGGTGCA CGACTCGGTG ACGTTCTGGG CGCAGTCGCA GGCCAAGGGC
GGCAAGACCC GCATCATCGG CCCCAACTGC CCGGGCGTCA TCAGCCCCGG CAAGTCCAAC
GCGGGCATCA TCCCCGCCGA CATCACCAAG CCCGGCAAGA TCGGCCTGGT GTCCAAGTCG
GGGACGCTGA CCTACCAGCT CATGTACGAG CTGCGCGACA TCGGCTTCTC GACCTGCGTG
GGTATCGGCG GTGACCCGGT CATCGGCACC ACCCACATCG ACTGCCTGCG GGCGTTCCAG
GACGACCCCG AGACCGAGGC GATCGTCATG ATCGGCGAGA TCGGCGGCGA CGCCGAGGAG
CGGGCCGCGG ACTTCATCAA GGAGAACGTG ACCAAGCCGG TCGTCGGCTA CATCGCCGGA
TTCACCGCGC CGCCCGGCAA GACCATGGGC CACGCCGGAG CCATCATCTC CGGTTCGGCC
GGGACCGCCG ACGCGAAGGC CAAGGCCCTC GAGGCCGCCG GTGTCCGGGT CGGCAAGACC
CCGTCGCAGA CCGCCGAGCT GATGCGCGAA GTGGTCAAGG GACTGTAG
 
Protein sequence
MTIFLNENSK IIVQGMTGAE GTKHTRRMLA SGANVVGGVN PRKAGSKVDF DGTELPVFAT 
VAEAMTETGA DTTVVFVPPK FAKDAVLEAV NAEIGLCVVI TEGIPVHDSV TFWAQSQAKG
GKTRIIGPNC PGVISPGKSN AGIIPADITK PGKIGLVSKS GTLTYQLMYE LRDIGFSTCV
GIGGDPVIGT THIDCLRAFQ DDPETEAIVM IGEIGGDAEE RAADFIKENV TKPVVGYIAG
FTAPPGKTMG HAGAIISGSA GTADAKAKAL EAAGVRVGKT PSQTAELMRE VVKGL