| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_0591 |
|---|
| Symbol | |
|---|
| ID | 8881774 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 621555 |
|---|
| End bp | 622412 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | polar amino acid ABC transporter inner membrane subunit |
|---|
| Protein accession | YP_003509398 |
|---|
| Protein GI | 291298120 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCAA AATCTGAACC CAAATCGGTG GCCGTGGAAG CGGCCACCGA TTTCCGCAAG
CACCCCGGGT TGAGCCCGCG GAAGAAGTAC CAGATCAGCA TGACCGTCCA GTACGTGGTC
ATCGCCGCGG TGATCCTGTT CGTCATCTTC GGCGCCGACT GGGCGGACCT GAGCGAGAAG
TTCTTCAACG CCGAACTGAT CGAGCGGTCG TTCCCGGAGC TGTTCACGGT GGCGCTGGCC
AACACGGTCA TCTACACCGC CTCCGGATAC GTCGTGGGCT TCGCGTTGGG CATCCTCATC
GCCGTGATGC GGTTGTCCTC GGCGGCCGTC AACCGCTGGA TCGCCACCGG ATTCATCGAG
ATCTTCCGGG GGCTGCCCGC CCTGCTCATC CTGACGTTCC TGGCGTTCTT CTGGCCGGTG
GCGTTCCCGA ACCTGATCAT CCCGGGCGGG AACTACGGCA CCGTCGCCCT CGGGTTGGGT
CTGTGCAGTG CCGCCTATAT GGCCGAGACC TTCCGAGCCG GTATTCAGGC TGTCCCCAAG
GGGCAGATGG AGGCGGCGCG TTCGCTGGGC ATGTCCCACA CCCGGGCCAT GGTCACGATC
ATCCTGCCGC AGGCGGTGCG GATCGTGATC CCGCCGTTGA CCAACGAGCT GATCCTGCTG
ACCAAGGACT CGTCGCTGGT GCTGACCGTC GGTATCGCGG CCAAGGAATC CGACCTGGTG
AAGTTCGGCA ACGATCTGGC AAACGAGACC GGTAACTCGA CCCCTCTGGT CGTGGCCGGT
CTGGCGTTTC TCGTCATCAC GATTCCGCTG AGCATCCTGG TACGGCGGCT GGAAGCAAGG
CAGGCCAAGG CACGATGA
|
|---|
| Protein sequence | MNPKSEPKSV AVEAATDFRK HPGLSPRKKY QISMTVQYVV IAAVILFVIF GADWADLSEK
FFNAELIERS FPELFTVALA NTVIYTASGY VVGFALGILI AVMRLSSAAV NRWIATGFIE
IFRGLPALLI LTFLAFFWPV AFPNLIIPGG NYGTVALGLG LCSAAYMAET FRAGIQAVPK
GQMEAARSLG MSHTRAMVTI ILPQAVRIVI PPLTNELILL TKDSSLVLTV GIAAKESDLV
KFGNDLANET GNSTPLVVAG LAFLVITIPL SILVRRLEAR QAKAR
|
|---|
| |