Gene Snas_0578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0578 
Symbol 
ID8881761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp607948 
End bp609225 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content71% 
IMG OID 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003509385 
Protein GI291298107 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCGGTT CATATCGTCG CTTGTTCGCC CGGCCCGGTG TCATGGGCAT GACCGGATTG 
AGTCTCTCCG TCAAGCTCGG GCCGCCGACG CTCAGCCTGG CCCTGTTGCT GGTGGTCTTC
GACGACACCG GCTCCTACGC GGTGGCCGGA CTGACGCTCA CCGGTCACGC TCTCGCACTG
GCCCTGTGCG CGCCACTGGG AGGGCGGCTG GTCGACCGGT TCAGTCCTCG CAAGGTGCTG
CCGCCGTATC TGCTCGTCCA CGCCGCCGCG TACACCCTGG TGCTGCTGAG CATCCACCTC
CCGGTGCCCG CGCCGCTGGT CGTGGCCGCC GCCGCCGTGC TCGGCGCCAC CAGCCCTCCG
GCGGGCGCCG TCATCCGGGG AGCCTGGCCC CGACTGGTGG CCCCCGGGTC GTTGAACACC
GCCTACGCGT TGGACAACGC GATCAACGAA CTCATGTTCA TCGCCGGGCC GGTGCTGGTG
GCCGGGTTGC TGCTGGTCAT GCCCGCCAGC GCGATCATCA TCGTGACCGG GACGGTGTTC
CTGGCGGCCG TGGCCGCCGT GACGATGTCC CGCGTGGTGC GCACCGCGGC TCCGGGGGCG
CCGACGGGCG ACGGCCCGTC CCGCGGCAGA CTGACGCGCC TGGTCGGGCC GCTGGCGCAC
CGGCCCACGC TGATCCTGCT GTTCATCGCC GCCCTGGGCA CCTTCACCTT CGGCAGTCTG
CGGGTCGCGA TGGTGGCCTC GGCCACCGTG CTCGGTTCGG CGGGGGCGGC CGGGATCTTC
GCCGGACTCC TGTCGGCCGG CACCCTCGCC GCCGGACTCG GGTACGGCGG CCGGCACTGG
TCCATCACCG GTCGCCGACT GCTGGGAATA CTGTTCGCCG CCGATTGCGT GCTGCTGTTC
GCCGGGGTGT TCGACGTCGG CTACCTGTGG CTGGCGGTCG TCATCACGGC GATCGGTGCG
GTGTCCGGTC CGCGCGACAC CCTGATACCC GTCATTCTCA CCGAACACGC GCCGGCCACC
GCCCGCACCG AGGTCTTCGC CTGGCTCAAC ACCTTCATGT GGATCGGCTA CGGCCTGGGC
ACCGCCGTCG CGGGTCAGCT GACCGGCCCG AAGGATTCCG GAGCTGCGGC ATTCGTCACC
GCCGGGATCG TCGCGGCCGG TGGCATACTC GTGTCGGCCC TGCTGCCCCG CGCGACAACC
GCGCCCGATC CGGCTGAACG CTCCGGCGAG AGTGGCGAAG TACTCGTCGA GCACGCGGAA
TCCCGCGGTC GCCGTTGA
 
Protein sequence
MFGSYRRLFA RPGVMGMTGL SLSVKLGPPT LSLALLLVVF DDTGSYAVAG LTLTGHALAL 
ALCAPLGGRL VDRFSPRKVL PPYLLVHAAA YTLVLLSIHL PVPAPLVVAA AAVLGATSPP
AGAVIRGAWP RLVAPGSLNT AYALDNAINE LMFIAGPVLV AGLLLVMPAS AIIIVTGTVF
LAAVAAVTMS RVVRTAAPGA PTGDGPSRGR LTRLVGPLAH RPTLILLFIA ALGTFTFGSL
RVAMVASATV LGSAGAAGIF AGLLSAGTLA AGLGYGGRHW SITGRRLLGI LFAADCVLLF
AGVFDVGYLW LAVVITAIGA VSGPRDTLIP VILTEHAPAT ARTEVFAWLN TFMWIGYGLG
TAVAGQLTGP KDSGAAAFVT AGIVAAGGIL VSALLPRATT APDPAERSGE SGEVLVEHAE
SRGRR