Gene Snas_0570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0570 
Symbol 
ID8881753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp601189 
End bp601755 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content73% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003509377 
Protein GI291298099 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCAAAC CGCTGCGCGC CGACGCCCGC CGCAACCGCG AGCGGATCCT CGACGTCGCC 
GAGGCCGTCT TCGACGCCAA GGGAACCCGG GCATCCACCG AGGACGTCGC CAGTGGTGCG
GGGGTCGGCA TCGGGACGGT GTTCCGCCAC TTCCCGACCA AGACCGACCT GCTCAAGGCG
ATCATCGGCC GGGGCGTCGA GCGGATGGCG GCCCAGATCC AGGTCCTCGT GGACGAGGGC
GACCCGGCCA CGGCGTTCTT CGAGTTCTTC ACCCGCATGG TCGCCGAGGC GTCGTCGAAG
AAGACCGTCG TCGACCTGCT CGGCGAGGCG GCCGAGGACC TGCGCGCCGA CAAGCCGATC
GGGGTGTGGC GCTCGGCGAT CGAGGCCCTG CTGGCCAAGG CCCAGGACGC CGGTGCGGTG
CGCGCCGACG TCCAGCCGCC CGAGGTGCTG GCGCTGCTGC TGGGCACCTG CCAGGCGGCC
GTGTCGGCGG GCTGGGACGA GCGACTGCGG GACCGCACCC TGGCCATCGT GTTCGACGGC
CTGCGGGCGC GCGGCCCGCA GCCCTAG
 
Protein sequence
MPKPLRADAR RNRERILDVA EAVFDAKGTR ASTEDVASGA GVGIGTVFRH FPTKTDLLKA 
IIGRGVERMA AQIQVLVDEG DPATAFFEFF TRMVAEASSK KTVVDLLGEA AEDLRADKPI
GVWRSAIEAL LAKAQDAGAV RADVQPPEVL ALLLGTCQAA VSAGWDERLR DRTLAIVFDG
LRARGPQP