Gene Snas_0561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0561 
Symbol 
ID8881744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp594831 
End bp595367 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003509368 
Protein GI291298090 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.969721 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.678738 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTTCTGG AAACCGTCGA GGACACCTGG GCGTTCGGCG CCCGGCTCGC CGCCCTGCTG 
CGACCCGGTG ACCTCCTGAT CCTCACCGGC TCCCTGGGCG CGGGCAAGAC CGCGCTGACC
CAGGGCATCG GCGAGGGCCT GAAGGTCGAG GGCACGGTGG CCAGCCCCAC CTTCGTCATC
GCGCGCATCC ACAAAGGATC AACCCCGTTG GTCCACGTGG ACGCGTATCG ACTGGGCGGT
CTGGACGAGC TGGACGACCT CGACCTGGAC GCCACCGTCG AGGACTCGGT AACCGTCGTG
GAGTGGGGTG CGGGCGTGGC CGAACAGCTC AGCTCCGACC ACCTCGAGAT CCGCATCGAC
CGGCGCCCCG ACGACGTCCG CGAACTGACC CTCCATCCCA CCGGCGGTGA CTGGGCCGAA
CGCCTGCGAG CGCTGGCGTT AAGCCCTGTC TCAGCGCGAT TAAGCCTGGC CTCAGTCGTC
CGGGGCTACC GTCAGAAGTG GGGAGGAGGC AGGAGGCCCC GGGGCCTAAA CTGTTGA
 
Protein sequence
MLLETVEDTW AFGARLAALL RPGDLLILTG SLGAGKTALT QGIGEGLKVE GTVASPTFVI 
ARIHKGSTPL VHVDAYRLGG LDELDDLDLD ATVEDSVTVV EWGAGVAEQL SSDHLEIRID
RRPDDVRELT LHPTGGDWAE RLRALALSPV SARLSLASVV RGYRQKWGGG RRPRGLNC