Gene Snas_0552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0552 
Symbol 
ID8881735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp584102 
End bp585955 
Gene Length1854 bp 
Protein Length617 aa 
Translation table11 
GC content69% 
IMG OID 
Productpyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 
Protein accessionYP_003509359 
Protein GI291298081 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATACCG TCCGGCAATT GGACCGGGTC GTCATCCGTT TCGCGGGGGA TTCCGGCGAC 
GGAATGCAAC TCACCGGGGA TCGGTTCACC GCCGAGACCG CGAAGCTCGG CAACGACCTG
TCAACTCTTC CCAATTTCCC CGCCGAGATC CGCGCCCCCG CCGGCACCCT GCCCGGGGTG
TCCAGCTTCC AGATCCACTT CGCCGACACC GACATCCTCA CACCCGGCGA CGCGCCGGGC
GTTCTGGTGG CGATGAACCC CGCCGCGCTC AAGGCCAACC TGCCCGACCT GCCCCGCGGC
GCCACCATTG TGGTCAACTC CGACGAGTTC ACGCCCCGCA ACCTCAAGAA GGTCGGCTAC
GCCGCCAACC CGCTCGAGGA CGGCACCGTC GAGTCGTACC AGGTACACGC GGTCCCGCTC
ACCTCGTTGA CCATCGAAGC GCTGGCCGAG TTCGACATCG GCAAGAACGA GGCGGCCCGC
GCCAAGAACA TGTTCGCCCT CGGCCTGGTG TCGTGGCTGT ACTCGCGGCC CACCGAGACC
ACCGAGAGCT TCATCAAACG CAAGTTCGCC GCCCGGCCCG AGATCGCCGC CGCCAACATC
GCGGCCCTGC GCGCCGGACA CGCCTACGGT GAGACCACCG AGACCTTCGC GGTCCGCTAC
GAGGTGCCGC CGGCCAAACT GCCGTCGGGC ACCTACCGCA ACATCACCGG CAACGTCGCC
CTCGCCTATG GCCTCGTCGC CGCCGGCGTC CGGGCCCAGC TGCCGGTCTT CCTGGGCGCG
TACCCCATCA CGCCCGCCTC CGACATCCTC CACGAACTCA GCAAGCACAA GAAGCTGGGC
GTGACGACCT TCCAGGCCGA GGACGAGATC GCCGCCGTCG GCGCCGCCCT GGGCGCCTCC
TACGGCGGCG CGCTGGGCAT CACCACCAGT TCCGGCCCGG GCATCGCGCT GAAGTCCGAG
ACCATCTCGC TGGCGGTCGC CTTCGAACTG CCGCTGGTGG TCGTCGACGT ACAGCGCGCC
GGACCCTCCA CCGGCATGCC CACCAAGACC GAACAGGCCG ACCTGCTGAT GGCACTGCAC
GGCCGTCACG GTGAGGCCCC GGTCGCGGTC ATCGCGGCCC AGTCGCCCTC CGACTGCTTC
CACGCCGCGA TCGAGGCGTG CCGGATCGCG CTGCACCACC GCACCCCGGT GATGCTGCTG
TCCGACGGCT ACCTGGCCAA CGGCTCCGAA CCCTGGTCGC TGCCGGAGGT CGCCGACCTG
CCCGACCTGC GCGTCGAGTT CGCCTCCGCG CTCAACCACG TCGACGAGGA CGGCACCGAA
GCGTTCTGGC CCTACAAACG CGACCCCGAA ACCCTGGTCC GCCCCTGGGC GGTCCCGGGC
ACCCCGGGTC TGCAACACCG CATCGGCGGT CTGGAGAAGA AGGACGGGAC CGGGGACATC
TCCTACGACC CGGCCAACCA CGACTTCATG GTCCGCACCC GCGCGGCCCG CATCGAGGCC
ATCAAGGTCC CCGACCTCAC CGTCGACGAC CCCGACGGCG ACTCCCGGGT ACTGGTACTC
GGCTGGGGCT CCACCTGGGG CCCGATCGGC GCGGCCTGCC GCGCGCTGCG CGGCCGCGGC
GTCCACATCG CCCAGGCGCA CCTGCGTCAC CTCAACCCGT TGCCCGCCAA CGTGTCCGAC
GTTCTGTCCT CATACGACAA AGTCGTGATC CCGGAGATGA ACCTGGGCCA GCTGTCCAGC
CTGCTGCGCT CCCGCTTCGA CGCCGACATC GTCGGCTACA ACCAGGTGCG GGGACTGCCC
TTCACCTCGC ACGAGCTGGA ATCCATGCTT GAGGAGGTCG TCAAGAATGT CTGA
 
Protein sequence
MNTVRQLDRV VIRFAGDSGD GMQLTGDRFT AETAKLGNDL STLPNFPAEI RAPAGTLPGV 
SSFQIHFADT DILTPGDAPG VLVAMNPAAL KANLPDLPRG ATIVVNSDEF TPRNLKKVGY
AANPLEDGTV ESYQVHAVPL TSLTIEALAE FDIGKNEAAR AKNMFALGLV SWLYSRPTET
TESFIKRKFA ARPEIAAANI AALRAGHAYG ETTETFAVRY EVPPAKLPSG TYRNITGNVA
LAYGLVAAGV RAQLPVFLGA YPITPASDIL HELSKHKKLG VTTFQAEDEI AAVGAALGAS
YGGALGITTS SGPGIALKSE TISLAVAFEL PLVVVDVQRA GPSTGMPTKT EQADLLMALH
GRHGEAPVAV IAAQSPSDCF HAAIEACRIA LHHRTPVMLL SDGYLANGSE PWSLPEVADL
PDLRVEFASA LNHVDEDGTE AFWPYKRDPE TLVRPWAVPG TPGLQHRIGG LEKKDGTGDI
SYDPANHDFM VRTRAARIEA IKVPDLTVDD PDGDSRVLVL GWGSTWGPIG AACRALRGRG
VHIAQAHLRH LNPLPANVSD VLSSYDKVVI PEMNLGQLSS LLRSRFDADI VGYNQVRGLP
FTSHELESML EEVVKNV