Gene Snas_0547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0547 
Symbol 
ID8881730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp578898 
End bp580994 
Gene Length2097 bp 
Protein Length698 aa 
Translation table11 
GC content67% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003509354 
Protein GI291298076 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTCGTC CCCGCCGCCA GCTGCCGCTT CTGAACTCCG GCACCCGGCA TGCCAACCGC 
AGCAACATGA CCTGCCGCTT CCGGTGCGGC AACGCCTGCG ATCATCCGGC ACCCAACCGT
TCACTCAACA CCTACTTCGG CGACCTGTTC GCGTCCCGCC GCAACGTGCT GCGGGCCGGA
TCGGTCGGTG CCATAGCGAT CGGCGCCGGG ACCGCAGGCC TGCTGGCGAC GGGCAACGCC
GCCGCCGACC CCGTCTCCGA GCCCGCCGGT CCGGCCGCGC CGGACCCGCG TCACCACTCC
GGCAAGCTCA CCTTCGAACC GGTGCCGCCC AACACCGACG ACAAGGTGAC GGTGCCGTCC
GGCTACGAGC ACTCCGTCAT CATCGAATGG GGGACGCCGA TCATCGAGGG CGCGCCCGAG
TTCGACATCG ACAACCAGAC CGCCAAGGCA CAGCGCGGCC AGTTCGGTTA CAACAACGAC
TACCTGGGCG TGCTGCCACT GGGCCGCGGC GACCACAAGG CCCTCATGGT CGTCAACCAC
GAGTACACCG ACGAGATCCT GATGTTCCGC GAATACCCGG GCGGCTCGGA GGCCGACCCG
GAGCAGATCA AGATCGCGAT GGCGGCCCAC GGGCTGTCGG TGGTCGAGAT CCGTCGCGAC
CGCGAGACCG GACAGTGGCG CACCATCATG GACGCCAAGG GCCGGTTCAG CGAGTACAAC
CGCCGCATCC ACCTGGACAC CAAGTTCAAG TTCACCGGCC CCGCCACCGG CGACGACCTG
GTCAAGACCA AGGCCGACCC GCGCGGCACC ACCCCGATCG GCACCCAGAA CAACTGCTCC
GGCGGGCTCA CCCCGTGGGG CACGGTGCTG TCGGGCGAGG AGAACTTCAA CCAGTACTTC
GTCGGCGGCG ACGCCGCGCC CGACGAGGCC AAGCCCGCCC TGAAGCGCTA CGGCTTCAAC
CTCGACGTGC ACCACGACGA GGAGAACCGC CGCTTCGACC GGGTGCAGGA GCGCTTCGAC
CTGTCCAAGC ACCCCAACGA GGCCAACCGC TTCGGCTGGA TCATCGAGAT CGACCCGCAC
AACCCGAACT CCAAGCCCCG CAAGCACACC ATGCTGGGCC GGTTCAAGCA CGAGGGCGCC
AACCCGATCA TCGCCAAGAA CGGCAAGGTC GTCGTCTACA TGGGAGACGA CGAACGCTTC
GACTACCTGT ACAAGTTCGT CTCGGACGAG AAGTACCGCA AGCACGACCG CGAGCACAAC
CTGCGGCTGC TGGAGCGCGG CACCCTGTAC GTGGCCAAGC TGTCCTTCAC GTCGGAGGAC
GAGATCGACG GTTCCGGCAA GCTCCCGTCC GACGGCGCCT TCGACGGCGC GGGCAAGTGG
ATCAAGCTGG CCCACAACGA CGAGTCCTTC GTGGACGGCT TCACCGCGGC CGAGGTCCTG
GTGAACACCC GGCTCGCCGC GGACAAGGTC GGCGCCACCA AGATGGACCG TCCCGAGGAC
GTGGAACCCA ACCGGCTCAC CGGAAAGATC TACGCCGCCC TCACCAACAA CAGCGACCGC
GGCAAGGACG GCAAGCCGGG CGCCGACGAG GCCAACCCGC GCAACAAGAA CAAGCACGGC
CAGATCATCG AGATCACCGA GAACCGCGGC GACAACACGT CCAAGGAGTT CAACTGGACG
CTGCCGATCG TGTGCGGCGA CCCCAACGAC GAATCGACCT TCTTCTCCGG CTTCGACAAG
TCGAAGGTCT CGCCGATCTC GTGTCCGGAC AATGTGGCCT TCGACTCCTC GGGCAAGAAC
CTGTGGATCT CCACCGACGG CAACGCCCTC GGCTCCCACG ACGGCCTGTT CGCGGTCCCG
CTGACCGGCG AGCACAAGGG CTGGCTGCGC CAGTTCCTGT CGGTCCCGGT CGGCGCCGAG
ACCTGCGGTC CGTTCATCTC CGAGGACAAC AAGACCGTGT TCGTCTCGGT GCAGCACCCC
GGCGAGGTCG ACGGTGCCAC TGTGGACAAG CCTGCCTCGG TGTGGCCCAA CGGCGACTAC
GCCAAGCCCG CCGTGGTCTG CGCCTGGCGT CCCGACGGCA AGGACGTCGG TCGCTAG
 
Protein sequence
MTRPRRQLPL LNSGTRHANR SNMTCRFRCG NACDHPAPNR SLNTYFGDLF ASRRNVLRAG 
SVGAIAIGAG TAGLLATGNA AADPVSEPAG PAAPDPRHHS GKLTFEPVPP NTDDKVTVPS
GYEHSVIIEW GTPIIEGAPE FDIDNQTAKA QRGQFGYNND YLGVLPLGRG DHKALMVVNH
EYTDEILMFR EYPGGSEADP EQIKIAMAAH GLSVVEIRRD RETGQWRTIM DAKGRFSEYN
RRIHLDTKFK FTGPATGDDL VKTKADPRGT TPIGTQNNCS GGLTPWGTVL SGEENFNQYF
VGGDAAPDEA KPALKRYGFN LDVHHDEENR RFDRVQERFD LSKHPNEANR FGWIIEIDPH
NPNSKPRKHT MLGRFKHEGA NPIIAKNGKV VVYMGDDERF DYLYKFVSDE KYRKHDREHN
LRLLERGTLY VAKLSFTSED EIDGSGKLPS DGAFDGAGKW IKLAHNDESF VDGFTAAEVL
VNTRLAADKV GATKMDRPED VEPNRLTGKI YAALTNNSDR GKDGKPGADE ANPRNKNKHG
QIIEITENRG DNTSKEFNWT LPIVCGDPND ESTFFSGFDK SKVSPISCPD NVAFDSSGKN
LWISTDGNAL GSHDGLFAVP LTGEHKGWLR QFLSVPVGAE TCGPFISEDN KTVFVSVQHP
GEVDGATVDK PASVWPNGDY AKPAVVCAWR PDGKDVGR