Gene Snas_0542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0542 
Symbol 
ID8881725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp573344 
End bp573820 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content67% 
IMG OID 
Productpyridoxamine 5'-phosphate oxidase-related FMN- binding protein 
Protein accessionYP_003509349 
Protein GI291298071 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.240126 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCCG TCGAAACCGC CAAGCACGTC ATCGACTCCA ACAAGTACCT CACCCTCGGC 
AGCGTCCTCG ACGACGGCAA CCCCTGGACA ACCCCCGTCT ACTTCACTCC CGACGGCTAC
CACCGCTTCT ACTGGGTGTC CAACCCCGAC TCGGTCCACT CCCGCAACAT CGCCGCCCGC
TCCCGGGTCC GCATCGTCGT CTTCGACTCC AGTGTCCGCA TCGGCGGCGC CGAAGCGGTG
TTCATGGACG CCGAGGCCAC CCTCGTCCCC GAAGCCGAAC TCGCCGACGC CTCGGCCCTC
TACAGCGGAC GATTCCCCGA ACTGCGCGAG TTCGGCGTCG ACGAACTGAC GGCACCGAAC
TCGCTGCGGC TCTACCGCGC CGACGCCCTC AACCACGAGA TCCTCGTCCG CGGCAGTGAT
CCGGTGTTCG GCAAGGGCAC CGACTCCCGG CTACTGGTGG ACATCCCCCG AGGCTGA
 
Protein sequence
MEPVETAKHV IDSNKYLTLG SVLDDGNPWT TPVYFTPDGY HRFYWVSNPD SVHSRNIAAR 
SRVRIVVFDS SVRIGGAEAV FMDAEATLVP EAELADASAL YSGRFPELRE FGVDELTAPN
SLRLYRADAL NHEILVRGSD PVFGKGTDSR LLVDIPRG