Gene Snas_0525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0525 
Symbol 
ID8881708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp549495 
End bp550274 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content66% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003509333 
Protein GI291298055 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.916517 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCGC GCATCGCGTA CCTGGGCACC CGGTTCAAGG CGCTGCTGGC CTACCGCTTC 
GAGATCATCA TCTGGCTCAT CGGGCCGCTG CTGCAGATGC TGCTGCTGGC GACGGTGTGG
CGCGCGGTCT ACGACGGACG ATCCACTGTC GACGGCGTTT CGCTGGCGGT GATGACGACC
TACGTCACGA TCTCCACGAT CCACTCGCTG ATCGCGCACG ACGACATGGA CGACTGGGTG
CACGAACGCG TCAACACCGG CGGCGTCGGC GTGGACCTGT TGCGGCCGTT GCCGTTCATG
GAACAGACAC TGTGGGGCAG CGTCGCGCAG CTGGGCATCA AACTGCTGAT GATCGTCGTG
GTGCTGCCGG TCGGCGCGGT CTTCGCCGGA CTGTCGGCTC CAGCACACCT GGGGTTGTAC
CTGATCGCGG CGGTACTGGC GTGGCTGGTC AACCTGTGCA TGTACCTGCT GCTGTCGTCG
ATCGTGTTCT GGACCCTGGA GGTCCACGGC CTGAACTTCA TGTACTTCGT CGTCAACGCC
TTCCTGTCCG GAGCGCTGGT GCCGTTGTGG TTCATGCCCG ACTGGCTGGC GACCGCGCTG
TCGTGGCTGC CGTTCCAGGC CATCGTGTTC ACCCCCGCGT CCATCTACGT CGGACAGTTG
ACCGGGACCG CGGCCTGGCA GGCCATCGGC GTGCAGTTCA CCTGGCTGGT GCTGCTGAGC
GCCACGGCCG TGCTGGTGTG GCGACGCGCC GTCCGCAAGA CCGTGGTGCA GGGAGGTTAG
 
Protein sequence
MTPRIAYLGT RFKALLAYRF EIIIWLIGPL LQMLLLATVW RAVYDGRSTV DGVSLAVMTT 
YVTISTIHSL IAHDDMDDWV HERVNTGGVG VDLLRPLPFM EQTLWGSVAQ LGIKLLMIVV
VLPVGAVFAG LSAPAHLGLY LIAAVLAWLV NLCMYLLLSS IVFWTLEVHG LNFMYFVVNA
FLSGALVPLW FMPDWLATAL SWLPFQAIVF TPASIYVGQL TGTAAWQAIG VQFTWLVLLS
ATAVLVWRRA VRKTVVQGG