| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_0518 |
|---|
| Symbol | |
|---|
| ID | 8881701 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 542962 |
|---|
| End bp | 545253 |
|---|
| Gene Length | 2292 bp |
|---|
| Protein Length | 763 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | DEAD/DEAH box helicase domain-containing protein |
|---|
| Protein accession | YP_003509326 |
|---|
| Protein GI | 291298048 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCTGG CGCCCGAGGA CTTGGTGCGG CGGCTCGCCG TCTATCGCGA CGGCGAGCCG
CTGCGGCACG TGCACGCGGT GCCCGCCCGG GTGGCCGAGT TCGCCGACTG GCCGGACTGG
GTTCCGGCCG AACTGCGGGA GAGCCTGGCG GCGGCCGGTA TCGAACGGCC GTGGCGGCAC
CAGATCGAGG CGGCGCGGCG GGTTCACGAC GGGAAGCACA CCGTGATCGC CACCGGCACC
GCCTCGGGCA AGAGCCTCGC GTACCAGTTG CCGGTGCTGT CGGCGCTGGC CACCGACGAG
GGCGCCTGCG CGCTGTACCT GTCGCCGACC AAGGCACTGG CCGCCGACCA GGCGCGGTCG
GTCAAGAAGC TGGCGTCCCC CGGCTGCGTC GCCGCCACTT TGGACGGTGA TACGCCGTAC
GAGCAGCGAC AGTGGATCGG CAGGCATGCC AACCTGATCC TCACCAACCC CGACATGCTG
CACCACGCGA TCCTGCCCCG GCACGACCGC TGGGCCCGAC TGCTGCGGCA GCTGCGGTAC
ATCGTCGTCG ACGAATGCCA CGCCTACCGG GGCGTGTTCG GTTCCCATGT GGCGCTGGTG
TTGCGGCGAC TGGCCCGGCT GGCGCGCCAC CACGGCGCCG ACCCGGTGTT CGTCGCGGCC
TCGGCTACGA CCGGCGACCC CGCCCACGGC GCGTCCCGGC TGCTGGGCGT CGAGGTCGAG
GCGGTCACCG AGGACCACTC CCCGCACCCC GGGGTCACCT TCGGACTGTG GGAACCGCCG
CTGCTGCCCG ACGTCACCGG CGAACACGAC GCGCCGGTGC GCAAGTCGGC GCTGACGGAG
ACCTCGCAGC TTTTGGCCGA CCTGGTGTCG CGCCAGGTCC GCACCGTCGC TTTCGTACGG
TCGCGGCGCG GGGTGGAGCT GGTGTCCTCG CTGGCCCGGG AATCGTTGGC GGGCACCGGA
AGATCGTCAC GGGTGGCGGC CTACCGGTCC GGTTACCTGC GCGAGGACCG TCGCGCCCTG
GAGAACGACC TGCGGGACGG ACTGCTGCTG GGCGTCGCGG CCACCAACGC GCTGGAGCTG
GGCATCGACA TCGCCGGACT GGACGCGATC CTGCTGTGCG GCTACCCGGG AACGCTGGCC
TCACTGTGGC AGCAGTCGGG CCGGGCCGGA CGCGGCGACA TCCCGGCACT GGCCATCCTG
GTGGCCCGCG ACGACCCACT GGACACCTAC CTGGTCCACC ACCCCGAGGC GGTGTTCTCA
CGGCCGGTGG AGGCCACCGT CCTGGATCCC GCCAACCCGT ACATCCTCGG CCCGCACCTG
CTGTGCGCCG CGTACGAGCA CCGACTGTCC CCGACCGATG TGGACCTGTT CGGTGGCGAG
ATCGCCGAGG AACTGCTGGG CGAGTTCGCC GCCGCGAAGA TCGTGCGGCA CCGCAAGACC
GGCTGGTTCT ACGTCGCCCG CGACCGCCCC GAGGTCGGAC TGCGCGGCGG CGTCGGCACC
CCCATCGACG TCATCGACAC CGAGTCCGGC GAACTGCTGG GCACCGTCGA CACCGCCTCG
GCCCACACGC TGGTGCACCC GGGCGCCGTC TACCTGCACC AGGGTTCGTC CTATCTGGTG
GAATCCCTCG ACGAGGAGGA CAGCGCGGCC TTCGTCACCT CCGTCCGTCC CGAATGGAGC
ACATACCCCC GGGACACCAC CGACCTGCGC ATCCTCAAAC TGCGCCGCTA CGTCGACGCC
GGACCTATCG GCCTGTGCTT CGGCGACGTC GAGGTCACCA ACCAGGTCGT CGGCTACCAG
CGCCGCAAAC TACCCGGCGG CGAGTTCATG GACGAGGTCC CACTGGCACT GCCGCCCCGC
ACTCTGCGCA CCGTCGCGGT GTGGTGGACG ATCAGCGAGA ACGCGATCCT CGACACCGGA
CTGTCCAAGA CCGACATACC CGGGGCCCTG CACGCCGCCG AACACGCCGC CATCGGTCTG
CTCCCACTGG TGGCCACCTG CGACCGCTGG GACATCGGCG GCCTGTCCAC CGCCGGTCAC
CCCGACACGG GGGTCCCGAC GGTGTTCGTC TACGACGGCC ACCACGGCGG CGCGGGCTTC
GCCGAACGCG GCTACACCGC CTGGCGGGAC TGGCTTTCGG CCACCCGCGA CGCGATCGAA
GCCTGCGGCT GCGAGTTCGG GTGCCCGTCC TGCGTGCAGT CCCCGAAATG CGGCAACGGC
AACGACCCGC TCGACAAGGC CGGGGCCCTG AAGGTGCTGG AACTGATCCT GGCCGCCGAA
CCCCGGCACT GA
|
|---|
| Protein sequence | MSLAPEDLVR RLAVYRDGEP LRHVHAVPAR VAEFADWPDW VPAELRESLA AAGIERPWRH
QIEAARRVHD GKHTVIATGT ASGKSLAYQL PVLSALATDE GACALYLSPT KALAADQARS
VKKLASPGCV AATLDGDTPY EQRQWIGRHA NLILTNPDML HHAILPRHDR WARLLRQLRY
IVVDECHAYR GVFGSHVALV LRRLARLARH HGADPVFVAA SATTGDPAHG ASRLLGVEVE
AVTEDHSPHP GVTFGLWEPP LLPDVTGEHD APVRKSALTE TSQLLADLVS RQVRTVAFVR
SRRGVELVSS LARESLAGTG RSSRVAAYRS GYLREDRRAL ENDLRDGLLL GVAATNALEL
GIDIAGLDAI LLCGYPGTLA SLWQQSGRAG RGDIPALAIL VARDDPLDTY LVHHPEAVFS
RPVEATVLDP ANPYILGPHL LCAAYEHRLS PTDVDLFGGE IAEELLGEFA AAKIVRHRKT
GWFYVARDRP EVGLRGGVGT PIDVIDTESG ELLGTVDTAS AHTLVHPGAV YLHQGSSYLV
ESLDEEDSAA FVTSVRPEWS TYPRDTTDLR ILKLRRYVDA GPIGLCFGDV EVTNQVVGYQ
RRKLPGGEFM DEVPLALPPR TLRTVAVWWT ISENAILDTG LSKTDIPGAL HAAEHAAIGL
LPLVATCDRW DIGGLSTAGH PDTGVPTVFV YDGHHGGAGF AERGYTAWRD WLSATRDAIE
ACGCEFGCPS CVQSPKCGNG NDPLDKAGAL KVLELILAAE PRH
|
|---|
| |