Gene Snas_0515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0515 
Symbol 
ID8881698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp539939 
End bp541138 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content71% 
IMG OID 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003509323 
Protein GI291298045 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGTCA GCATCGAACG CCCCACCACC GTCCGGGGCC CGGCCGCCTG GCAGGTCGGC 
CTGGCCGGAA CCGCGATGAT CGCCGCCACG TTCGGCTTCG CCCGCTACAG CTACGGCCTC
TACGCCCCCG CCCTGCGCGC CGAGTTCGAC CTGTCGGTCG GCCTGGTCGG CCTCATCGGC
TCGGCCACCT ATGTCGGGTA CCTTTTGTCG CTGCTCGTCG TCGGCGTGTT CTCGCAACGC
CTCGGCCCCC GCCCGTTGGT GGTCATCGGC GGTCTGTCGG CGGCGGTCGG CATGCTGGCG
GTCGGCCTGG CCACCGGTCC GTGGCTGCTC GTGGCCGGAC TCGTGCTGGC GGGTACCAGC
CCCGGCTGGG CCTGGGCGCC GTACTCCGAC GCCGTCGACC GGCTGGTGGA GCCGGGCAAG
CGGCAGCGCG TCATGGGTCT GATCCCCAGC GGCACCGCCT TCGGCGTCGT CCTGGCCGGA
CCGGCCGCCT TGTTCCTGTA TGGACCCGTG TGGCGGGTCG CCTGGCTGGT GTTCGCGGTG
ATCACCTTCG CCGTCACCGT CTACAACGCA CTGATCCTCC CGGGAACCCG CCGCCGGGAG
ACACCAGACG TCGAAACCCA AGCGCGCGTG GGACCATCGT GGTTCCTCCG CCCCGGCGTG
ACGCGGCACT ACCTGACCGC GTTCTCCTAC GGGCTCATCG GCGCCATCTA CTGGACCTTC
GCCGTCGAGG CCATCGCCGC CGACTCCACC CGCTCCACGG CCCCACTGTT CTGGACCCTC
ATGGGCGCGG TCGGCATGCT CGGCGCACTG GCCGGAGTCG CGATCGGACG CTACGGCCTG
CGAGTCGTCC ACATCGGCCT GTTCGCCTCG ATGGCGGCGG CGATCCTGCT GCTGGGCCTG
GCACCCGGCT CACTGGCGGC CGTCATCGCC TCGGCCGTCC TCTACGGTCC GGCGTTCATG
GCCGGATCGA GCCTGCTGCA GGTGTGGAGC TACGAGCTGT TCCCCGACCG ACCCACCACC
GGCTTCAGTG CGACGGTGTT CTTCATCGGC ATCGGCACGA TCCTGGGCCC GACGCTGGCC
GGTCAGATCG CGAGCGGCTG GGGTCTGGGC ATCACCTTCG TGGCCACAGC GACCGTCGCG
GCCGCCACCC TGGCGATCGC CCCGCGGCGC CAAGCTGCCA TCCGCACGCC ACGGCGCTGA
 
Protein sequence
MTVSIERPTT VRGPAAWQVG LAGTAMIAAT FGFARYSYGL YAPALRAEFD LSVGLVGLIG 
SATYVGYLLS LLVVGVFSQR LGPRPLVVIG GLSAAVGMLA VGLATGPWLL VAGLVLAGTS
PGWAWAPYSD AVDRLVEPGK RQRVMGLIPS GTAFGVVLAG PAALFLYGPV WRVAWLVFAV
ITFAVTVYNA LILPGTRRRE TPDVETQARV GPSWFLRPGV TRHYLTAFSY GLIGAIYWTF
AVEAIAADST RSTAPLFWTL MGAVGMLGAL AGVAIGRYGL RVVHIGLFAS MAAAILLLGL
APGSLAAVIA SAVLYGPAFM AGSSLLQVWS YELFPDRPTT GFSATVFFIG IGTILGPTLA
GQIASGWGLG ITFVATATVA AATLAIAPRR QAAIRTPRR