| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_0497 |
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| Symbol | |
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| ID | 8881680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 520296 |
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| End bp | 523055 |
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| Gene Length | 2760 bp |
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| Protein Length | 919 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_003509305 |
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| Protein GI | 291298027 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.324618 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.923376 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGCAAA CCACGAAACG TCTGGTCATT GTCGAGTCAC CGGCAAAGGC CCGCACCATC
GCCGGGTACC TCGGCGATGG TTACATGGTC GACTCCAGCC TCGGGCACAT CCGGGACCTG
CCCCGCAACG CCAAAGAGGT TCCGCCCAAG TACGCCAAGG AACCCTGGTC CCGGCTCGGC
GTCGACGTCG ACAACGACTT CGCACCGCTC TATGTGGTCA ATCCGGATCG CAAGGCCCAC
GTCAAGACCC TCAAGGACCA ACTGGCGGAA GCCGACGAAC TCCTACTGGC CACCGATGAG
GACCGCGAGG GGGAGGCCAT CGCCTGGCAC CTCCTGGAAA CCCTGAAGCC CAAGGTTCCC
GTCAAGCGCA TGGTCTTCCA CGAGATCACC AAGTCCGCGA TCACCCAGGC CGTCAACAAC
CCCCGCGAGA TCAACAGATC CCTAGTGGAC GCCCAGGAGG CGCGCCGGAT CCTCGACCGC
CTCTACGGTT ACGAGGTCTC GCCGGTGCTG TGGAAGAAGG TCATGCCGCG GCTGTCGGCG
GGCCGGGTGC AGTCGGTGGC CACCCGCATC GTGGTGGAGC GGGAACGGGC CCGGATGCGG
TTCGTCACCG CCGACTACTG GGGAATCACC GCCCAGTTGC GCACAAAGGA CGGTGCCGAC
TTCGCGGCCA ACCTGCTGTC CTTCGACGGC GACCGGGTCG CCACCGGCAA GGACTTCGAC
GCCGAGACCG GCCGCCCCAA GGCCGGTGTG GTCCACCTCG ACGAGGCCGG TGCCCGGGGT
CTGGCGGCCC GGCTGGCGAA CGTCCCCTAC ACCGTCGGCA AGGTCGACAA CAAGCCCTAC
CGCCGCCGCC CCTACCCGCC GTTCATGACC TCGACGCTGC AACAGGAGGC GTCCCGCAAG
CTGCGGCAGT CCAGCGCCCA GACGATGCGG TTGGCGCAGC GGCTGTACGA GAACGGCTAC
ATCACCTATA TGCGTACCGA CTCCACGAAC CTGTCGGAGA CGGCGCTGAC GGCGGCCCGC
AGGCAGGCCG CGCAGCTGTA CGGCGAGCGT TTCGTGCCCG CCGAGCCGCG CCGCTACGCC
CGCAAGGTCA AGAACGCCCA GGAGGCCCAC GAGGCGATCC GCCCGTCGGG CGACAGCTTC
CGCACCCCCT CGGAGCTGGC CAGCGAACTG TCCACTGAAG AGCTTCGGGT CTACGAGCTG
ATCTGGCGCC GCACCATCGC CTCCCAGATG ACCGACGCGG TCGGCAACTC GGTCTCGGTG
CGCATCAACG TCACCTCCGC CACCGGCGAG GACTGCGAGT TCTCCGCGTC CGGAAAGACC
ATCACCGACC CCGGCTTCCT CAAGGCCTAT GTGGAGTCCC GTGACGAGGG CGAGGCCGAC
GACGCCGAGC GTCGCCTGCC CGAACTCGAA CGCGGCCAGG CCCTGACCGC CGACTCCCTC
GAACCCGCCG GACACCGCAC CCAGCCCCCC GCCCGCTACA CCGAAGCCTC CCTGGTCAAA
GCCCTGGAGG AGCGCGGCAT CGGCCGTCCC TCCACCTACG CGTCCATCAT GCAGACCATT
CAGGACCGCG GCTACGTCTT CAAACGCGGC CAGGCCCTGA TCCCGGCCTT CCTGGCCTTC
GCGGTCGTGG GCCTGCTGGA GAAGCACTTC GCCCGGCTGG TCGACTACGA CTTCACCGCG
GGCATGGAGT CCGAACTGGA CGACATCGCC GCCGGTGAGG GCCGTTCGCT GGAGTTCCTG
CGCAGCTTCT ACTTCGGCGG CAACAACGCC GCCGACGGCA CCGTCGCGGC CTCCGGTGGC
CTGAAGAAAC TCGTCGCCGA GGAACTGGGC CGCATCGACG CGCGCGGCGT CAACTCCATC
CCGCTGTTCA CCGACGAACA GGAGCGCCGG GTCGTGGCCC GGGTCGGCCG CTACGGCCCC
TACCTGGAAC GCTTCGCCCC CACCGCCGAA CCCGGCGAGC CCGGCGAACG CGTCTCCATC
CCCGACTCCC TGGCCCCCGA CGAGCTCACC CAGGCCAAGG CCGAGGAACT CTACGAGGTC
GGTTCGGGCG AACGCGAACT CGGCGAGCAC CCCGAGACCG GTGAGATCGT CTACGCCAAG
TCCGGCCGTT ACGGTCCCTA CGTCACCAGC GGCGAGAAGT CCGCGTCCCT GCTGTCCGAC
ATGAAACTCA AGGACATCAC CCTCGACGAC GCGGTCCGGC TGCTCACCCT GCCCCGGCTG
GTCGGTGTCG ACGCCGACGG CGAGGAGGTC CGCGCCGGGC TCGGCCCGCA CGGCCCCTAC
GTCGTCAAGA AACGCGACTA CCGCTCCCTG GAGACCGAGG AGCAGCTCTT CACGGTCACC
CTGGAACAGG CCCAGGCCCT GCTGGCCCAA CCGAAGAAAC GGGGACGTCA GGCGGCCCGC
CCGCCGCTGA AGGAACTGGG CACCGACCCG GCCACCAAGC TCACCGTCGT CATCAAGGAC
GGCCGCTTCG GCCCCTACGC CACCGACGGC GAGACCAACG CCTCGCTGAA GAAGACCGAC
ACGATCGAGG ACATCACGAT CGACCGGGCT TCGGAACTGC TGGCCGAACG CCGCGCCAAG
GCCCCGGTGG CCAAGAAGGC CGCGAAGAAG GCGGCGAAGA AGACCACCGC CAAGAAGACG
GCGAAGAAAA CGGTGAAGAA GGCGGCCAAG AAAACCGCCA AGAAGACCAC CACGACCAAG
AAGGCCGCGA AGAAGTCGGC CGCCAAGAAG AAGACCGGCA ACCCCCGCGA GGACGCCTGA
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| Protein sequence | MAQTTKRLVI VESPAKARTI AGYLGDGYMV DSSLGHIRDL PRNAKEVPPK YAKEPWSRLG
VDVDNDFAPL YVVNPDRKAH VKTLKDQLAE ADELLLATDE DREGEAIAWH LLETLKPKVP
VKRMVFHEIT KSAITQAVNN PREINRSLVD AQEARRILDR LYGYEVSPVL WKKVMPRLSA
GRVQSVATRI VVERERARMR FVTADYWGIT AQLRTKDGAD FAANLLSFDG DRVATGKDFD
AETGRPKAGV VHLDEAGARG LAARLANVPY TVGKVDNKPY RRRPYPPFMT STLQQEASRK
LRQSSAQTMR LAQRLYENGY ITYMRTDSTN LSETALTAAR RQAAQLYGER FVPAEPRRYA
RKVKNAQEAH EAIRPSGDSF RTPSELASEL STEELRVYEL IWRRTIASQM TDAVGNSVSV
RINVTSATGE DCEFSASGKT ITDPGFLKAY VESRDEGEAD DAERRLPELE RGQALTADSL
EPAGHRTQPP ARYTEASLVK ALEERGIGRP STYASIMQTI QDRGYVFKRG QALIPAFLAF
AVVGLLEKHF ARLVDYDFTA GMESELDDIA AGEGRSLEFL RSFYFGGNNA ADGTVAASGG
LKKLVAEELG RIDARGVNSI PLFTDEQERR VVARVGRYGP YLERFAPTAE PGEPGERVSI
PDSLAPDELT QAKAEELYEV GSGERELGEH PETGEIVYAK SGRYGPYVTS GEKSASLLSD
MKLKDITLDD AVRLLTLPRL VGVDADGEEV RAGLGPHGPY VVKKRDYRSL ETEEQLFTVT
LEQAQALLAQ PKKRGRQAAR PPLKELGTDP ATKLTVVIKD GRFGPYATDG ETNASLKKTD
TIEDITIDRA SELLAERRAK APVAKKAAKK AAKKTTAKKT AKKTVKKAAK KTAKKTTTTK
KAAKKSAAKK KTGNPREDA
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