Gene Snas_0487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0487 
Symbol 
ID8881670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp510162 
End bp511301 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content64% 
IMG OID 
ProductPeptidase M23 
Protein accessionYP_003509295 
Protein GI291298017 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.146953 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACCC CGGCCGAGAA CGAGGAGTCT GCCTCCACCG TCCGCCGCTG GACGCGTAAA 
CGCCTCTGGT GGACGATCGT CGCAGCGACG ACCGCGTTGT TGTGCTGCGG TGGTACGACC
TTCTACGTCG TTTTCCTGAC GGTCAGCAAC AACAGCGACA CCGGGGCCGC CAACTACGCG
GGTTGTGGCA ATGGCACGGA GATCTCCATC AGCGGCGACA TGCCGAAGAT CAACGACCTG
AACGAAGAGC AGGTCGGCAA CGCGGCCATC ATCATCCAGA CCGGGCAGAA GCGGAACATG
TCACCGCGAG CCTGGGTGAT CGCCGTGGCC ACCGCGATGC AGGAATCCAC GCTGCACAAC
TACGGACATC TTGGCGACCG CAACGACCAC GACTCGCTTG GTCTCTTCCA GCAGCGCCCT
TCCAAGGGTT GGGGAACCCC TGACCAGGTC ACGGACCCTG AATACGCCTC CACGAGCTTC
TACAAGCGGC TGAAGAAGGT CGAGGGCTGG GAGTCGATGG ACCTCACCGC CGCCGCCCAG
GCAGTCCAGC GCTCGGCCTT CCCGGACGCT TACGCGAAAT GGGAACCCCT CGCGACCGAC
GTCGTCAACG TCCTCACCGA AGGTGGTGCC CGCACTGCCG CCGACGGTGG CAAGTCGGGC
GAATGTGCCG AGGGTGCCGA GATCGCCGCC TCGGGTTGGA CGGCTCCGGT GAAGGACGGC
ATCGTCTCCG GTTTCCGTAC CCCGCAACGG CCCGACCACT ACGGTGTCGA CCTGGGATCC
AAGCGCGGCA CCGAGATCCG CGCGGCCGCG AGTGGCGTCG TCACCACCTC CGAGTGCAAT
GCCTCCACCA ATAACTGTGA TGTGGACGGT TCGCCATCGG TGCTGGGTTG TGGCTGGTAC
GTGGACATCG AACACGCCAA CGGCATCATC ACCCGCTACT GCCACATGGT CGAACAACCC
AAGGTCGATG TGGGACAACG GGTCAAGGCT GGCGAGGTCA TCGGCATCTC CGGATCGTCC
GGTAACTCCT CCGGGCCGCA CCTGCACTTC GAAGTCCACG AGGGTGGGGA CGCCTCCAAC
AACGGCGCCA TCGACCCCGT CGCGTGGATG AAGCAGCAGG GGATCAACAT CGACGGTTAG
 
Protein sequence
MDTPAENEES ASTVRRWTRK RLWWTIVAAT TALLCCGGTT FYVVFLTVSN NSDTGAANYA 
GCGNGTEISI SGDMPKINDL NEEQVGNAAI IIQTGQKRNM SPRAWVIAVA TAMQESTLHN
YGHLGDRNDH DSLGLFQQRP SKGWGTPDQV TDPEYASTSF YKRLKKVEGW ESMDLTAAAQ
AVQRSAFPDA YAKWEPLATD VVNVLTEGGA RTAADGGKSG ECAEGAEIAA SGWTAPVKDG
IVSGFRTPQR PDHYGVDLGS KRGTEIRAAA SGVVTTSECN ASTNNCDVDG SPSVLGCGWY
VDIEHANGII TRYCHMVEQP KVDVGQRVKA GEVIGISGSS GNSSGPHLHF EVHEGGDASN
NGAIDPVAWM KQQGINIDG