| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_0466 |
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| Symbol | |
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| ID | 8881649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 483532 |
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| End bp | 486618 |
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| Gene Length | 3087 bp |
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| Protein Length | 1028 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | |
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| Product | transcriptional regulator, winged helix family |
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| Protein accession | YP_003509274 |
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| Protein GI | 291297996 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0132601 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000794556 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGGCGGTGC TGGGGCCCGT GCGGGTCTGC GTCGGCGGGG TGCCGGTCGA GGTCTCGGCC
GGGCGGGTGC GGTTGCTGCT GGCGCGGTTG GCACTGGCCC GGGGGCGGGT GGTGACCGCT
GAGGTGCTGA TCGAGGAGCT GTGGGGCGGG GAGCGGCTCT CAGACGCTGT GAATACCTTG
CAGGCGTTGG TTTCGCGGTT GCGCAAGGTG GTGGGGGCCT CGGCGGTGGA GCTGGTGGGT
GGCGGGTATC GGTTGGCGGC GGCGGTGGAC GCGGAGCGGT TCGAGGAGTT GGCCGCGCGG
GGGCGGCGGG AGTTGGGGGC AGGGGAGGTC GCGGCGGCTT TGGTGAGTGT GGACGCGGCC
TTGGGGTTGT GGCGTGGCCC GGCGTTGGGG GATTTGGCGG ATGTGGGGTT CGTGCGGGCG
GCGGCGGGGC GGTTGGCGGA GGCGCGGCTG CGGGCCGTGG AGGATCGGTT CGAGGCCGCG
TTGCGGTTGG GGCGGCACGG GGACGTGTTG GGAGAGCTGG CGGGCGCGGT AGCGGAGCAC
CCGGTGCGGG AGCGGTTGGC GGCGTTGCGG ATCCGGGCGC TGTACGAGGT GGGGCAGCAG
TCGGAGGCCT TGGCCGCGTA CGAGCGGGTG CGGGCGGAGT TGGGGGAGCG GTTCGGGGTG
GATCCCGGGG CCGAGTTGCG GCGGGTGCAC GTGGCGATGT TGCGCGGCGA GCTGGAACCG
TTGCTGGAGC GGCCGAAGCC GGTGCCGGGG CGGTTGCCCG CGCAGCTGAC GAGTTTCGGG
GGCCGGGACG CGGAGTTGGC GACGTTGGCG GGGGCGCTGG CCGAGGCTCG GCTGGTGACG
GTGGTGGGGC CCGGCGGTGT GGGCAAGACG CGGTTGGCGG TCGAGGCGGC GGGACGGCTC
GACGCGCACG AGCGGGGGCG GGTGTGGTTC GTGCCGTTGG CCGGGGCGGC GGGGGACGTC
GGTGGCGCGG TGCTGGGGGT GCTGGGTGCC GAGCGGGTGC GGCCGGGCGG GGGCAAGGGG
CTGGATCAGC TCGTGGAGTT GATTGGTCCC GAGGCGGCGG TGCTGGTGCT GGACAACTGC
GAGCATGTGG TGGCCGATGC CGCCGACTTC GCCGGGGCGC TGCTGGAACG GTTGCCGCTG
TTGACGATCC TGGCCACCAG CCGGGAGCCG CTGGCGATCA CGGGGGAAGC GTTGTGCCGC
TTGGAGCCGC TGGGCTTGCC CAGCGGGGTC GCGATGGCGG CGGAGTCGGC GGCGGTGCGG
TTGTTCGTGG AACGGGCGCG GGCGGTGCGG CCGGGGTTCG CGTTGGACGA GACGACGGCG
GGACCGGTCG TCGACATCTG CCGCAGGCTG GACGGACTGC CGTTGGCGCT GGAGCTGGCG
GCGGCTCGGT TGCGGGCGAT GCCCCTCACC GAGATCGTGA GTCGGCTGGA CGACCGGTTC
CGGCTGCTCG CGTCGGGAAG CCGGACAGCG TTGCCACGGC ATCGGACGCT GGCCGGGGTG
GTGGAGTGGA GCTGGGAGTT GCTGACCGGG CCGGAGCAGC TGCTGGCCGC GCGGTTGTCG
ATCTTTCCGG GCGGCGCGAC GGTCGCCGCG CTCGAGGAGG TGGCCTCCGA CGAGACGGTG
CCGGTCGGGG AGGTCGTCTA TGTTCTCGGG TCGCTGGTGG AGAAGTCGCT GGTGCACTGG
GACGGGCAGC GGTACCGGAT GCTGGAGACG ATTCGCTCGT TCGCGGGCGA GCGGCTGGAT
GACGCCGAGG GCTTCGGTGC CCGGTTCACG CGGTACTTCG CGGCGGTGGC CGAGGAGCAG
GAGCCCCGGT TGCGGTTGGC CGAACAGCTC GACGCGTTGC GCTGGTTCGA CACCGAGTAC
GACAACCTGG TGGCGGCGCT GCGAGCGGCC ATCGACGGAC GTGTCGCGGA CGTGGCGGCG
CGGCTGGTCG GGGCGGTGCA GTGGTACTGG CACACCATGC GTTTCGACGC CAGGTCGGAC
GGGTTCGTCG CCGAGGTGCT CGACTTCGGG GAGGCGCTTC CCGATCACAG CCGGGCGGCG
CTGGCCCTGT CATGGATGCT CACCGACGAC ACGTCGGCCG CCGATCCCGA GCGGCTGCGA
TCGGCTATTG AGGACTGTGT GAGTACCGGT GCGCTGGAAC GGTATCCGAC GTTGCTGTTC
CTGACGGCAC CGATGGCCTA CTTCATGGGG CAGGTCGAGC TGGCCGAGCG GCTGCTGCGC
GGCGCCGAGG AACGTTCGCA GCCGTGGTCG GCGGGCATCG CGGCCTGGGC GCGGTCGGTG
TTCCGCGCCG ACCAGGGCGA CTGGGCGGGC GCGGCGGCAC TGCGGCTGCG GGCGTTGCGC
CAGTACGAGA CTGCGGGCGA CCGGGTCGGG CTGGCGTTCA TCCTCGGCAG GGTCGCGCAG
GACCACGCAC TGCGGGGCGA GCACGACGAG GCGATCGCGG CTCTTCAGCG GTGTGTGGTG
CTGGCGGCCG AGATCAGTTC GGCGGAGGAG ATCTCGTACC GGTCCCGGCT GGGCGCGCAG
CGGTCGCGGG CCGGGGACGC CGACGGGGCC CGGCGGGAGC TGGACGTCGC GCTGCGGCAG
GCGATCGAGC GCGGGCAGCC GCAGCTGCGG ATCGAGCCGC TGGTGGGCCT GGCCGACCTG
CACCGCCGCG CGGGGGAGGC GGATCGCGCC GATGCGCTGC TCGCCGAGCT GGAGACGCTG
GTGCGGGGCC TGGCCGGGGC CGAGCAGACC GCCGCAGCCG TCATCGCGCC GGTCCGGATG
GCACTCCGGC TCGACACCGG TGACGCGAAG GCGGCGGAGA CACTGCCCGT GGTGGCCGCG
ACCGGAACCC TCGCCCGGGA CCTGGCGGCC CCAGCCGCCG AACTGTTGGC CCGGCTGCGT
TTCCGGGACG GCGACCCGGA GGGGGCCGCG GTCGCACTGG GGATGAGCCA GGTCATCCGC
GGCGTCCTGG ATCGCGGCGA CCCGGAGTTG CGGGCACTGA CGGACGCACT CGTCGCACGG
CTCGGCGCCG ACGGCTACGC GGCGGCGTTC CAACGGGGCG CGGAGCTGCC ACGGGACGAG
GCGCTGCGCC GCGTCGGCAC GTTCTGA
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| Protein sequence | MAVLGPVRVC VGGVPVEVSA GRVRLLLARL ALARGRVVTA EVLIEELWGG ERLSDAVNTL
QALVSRLRKV VGASAVELVG GGYRLAAAVD AERFEELAAR GRRELGAGEV AAALVSVDAA
LGLWRGPALG DLADVGFVRA AAGRLAEARL RAVEDRFEAA LRLGRHGDVL GELAGAVAEH
PVRERLAALR IRALYEVGQQ SEALAAYERV RAELGERFGV DPGAELRRVH VAMLRGELEP
LLERPKPVPG RLPAQLTSFG GRDAELATLA GALAEARLVT VVGPGGVGKT RLAVEAAGRL
DAHERGRVWF VPLAGAAGDV GGAVLGVLGA ERVRPGGGKG LDQLVELIGP EAAVLVLDNC
EHVVADAADF AGALLERLPL LTILATSREP LAITGEALCR LEPLGLPSGV AMAAESAAVR
LFVERARAVR PGFALDETTA GPVVDICRRL DGLPLALELA AARLRAMPLT EIVSRLDDRF
RLLASGSRTA LPRHRTLAGV VEWSWELLTG PEQLLAARLS IFPGGATVAA LEEVASDETV
PVGEVVYVLG SLVEKSLVHW DGQRYRMLET IRSFAGERLD DAEGFGARFT RYFAAVAEEQ
EPRLRLAEQL DALRWFDTEY DNLVAALRAA IDGRVADVAA RLVGAVQWYW HTMRFDARSD
GFVAEVLDFG EALPDHSRAA LALSWMLTDD TSAADPERLR SAIEDCVSTG ALERYPTLLF
LTAPMAYFMG QVELAERLLR GAEERSQPWS AGIAAWARSV FRADQGDWAG AAALRLRALR
QYETAGDRVG LAFILGRVAQ DHALRGEHDE AIAALQRCVV LAAEISSAEE ISYRSRLGAQ
RSRAGDADGA RRELDVALRQ AIERGQPQLR IEPLVGLADL HRRAGEADRA DALLAELETL
VRGLAGAEQT AAAVIAPVRM ALRLDTGDAK AAETLPVVAA TGTLARDLAA PAAELLARLR
FRDGDPEGAA VALGMSQVIR GVLDRGDPEL RALTDALVAR LGADGYAAAF QRGAELPRDE
ALRRVGTF
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