| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_0460 |
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| Symbol | |
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| ID | 8881643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 472009 |
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| End bp | 477198 |
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| Gene Length | 5190 bp |
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| Protein Length | 1729 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | putative signal transduction protein with Nacht domain |
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| Protein accession | YP_003509268 |
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| Protein GI | 291297990 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.832377 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0598199 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAATG TTGGAATTGC CAACAGCAAA GATCGCGTCG AAGCGTTGTT GTGGGCAGCC
CCTACCGGCC CAGTACCTGC GCCACCAGTT GACACCAAGT CGCAAGTGTT GCCAGTTAGA
GAGCTCGATT GGTCTGATGC GGAGCGCCTG TTTCTTCGGT TGTTGCACAC AGTCCAACCT
GTTCAATTTG CCAAGCTGTT CGGGGTTCCT GGTCAGTCTC AAGCCGGTAT TGATGCTTAC
GCCCGACTTC CGTTGGACTT GACGGATAGT GAAACAAACG CTCGCGACTA CATCACTCTG
CAATCACGGC GAGTGGAGGA ACTCACCGCC GCCAAGGTTG AGAAGGCCAT TGACGACTTC
GTCGCTGGAG AGTGGTGCAG TAAGACTTCC GTCTTCTATT ACGCCACATC GTTCGACTTG
CAGCACACGA AACTCGACGA GGTGATTCGC AAGCAAACAA GCCGACTGGC GAGGATGGGG
ATAACGTTCG TTCCGTGGGG GGTACAGGAA ACTTCTGCGT TGTTGAAGGA TCATCCTCGC
ATTGTCTATG ACTTTTTCGG TAAGCCATGG GTTGAGCGAT TTTGCGGCAT GGAGGCGGCC
CGATCTCTCG ATGAGCATTT GTCGCTCCAG GACAGGCGAA CTCTGCGGTC AGAGTTGAGG
AGCCTCTATC AGGCCGTCTT TTACTCGCAA GGAAGTGGCC CTTCAGCTGA CCAAACTGAA
TACGCCAAGC GGTTCATTGT CCTAGGTGTT GCCCCCTATC GCGAACGATC TGTAGTTGAG
CAAGACGGAT CTCAGGCACG AGACGAGAGG CTACGACCTG ACCAAGGTTT GGCAGATGGG
GAGGCATATG TTGAATCTCA ACCCGGCATA GAGCGTCAAT CCTTCAGGTC AGCACGGCAC
TTGCTACGAA GCGCAATTGG CAACCCGACA CACCCAGTCG ACACCGTCGA AGCTGATGAA
TGGTTGACCG ACGGAAAATA CAGGTTGCTC GTTGGCCGCC CCGGAGCCGG TAAGTCAAGC
CTCCTGCGAT TCGTCGCAAC TGACCTTCTT TCACCTCAAC CGCAATCAAT CCCGCTGCAA
CGCGAGCATG CCCCCGATTT GCCAATCTGG TTGCCTTTTG GATACTTGTG TCGCCACCTT
GAAGCATCAA CTGAGAACTC GGTGGTATCA GCAATGGAAG CCTGGCTGAA GGCCCACAGC
GCCGATCACC TCTGGCCATT GGTGAAGCAT GCCCTTCGCG ACGATCGCCT ATTGTTGCTC
GTGGATGGTG TGGACGAGTG GAGCAATATC GGCGCAGCCG AACAGGCACT CGGAAAACTG
GAGACGTTTC TCGGCCAGAC CAAAGCCTCG GCAATCCTCT CCACGCGTCC ATACGCACTC
CACAGGCTCA ACTGGCGGTT GCCATGGGGT AAAGCAGAGA TCACGCTTCT GAACGACCAA
CAGCGCCTCA CCATCGCCAG TCAGCTACTG ATACCAGACA CATTGGAGAA AAGCAAATCA
TCCAATCCAC TGCCGTGGGT CGGCGTTGAA CCGTTCCTAG CTCAGCTTTC TGCCACGGCC
GAACTTAACG ACTTGTCCCG CACCCCACTC TTCTTGTCGT TGCTGGCAAC GACGTGGCAG
GGCGAGCCTT TGCCGCAGCA ACGGTTCAGA ATCTACGACC ACCTCGTTGA GCTTTTGGTC
GGAAAACACC CTCAAATGCG ACGGCGTGCT TCACATGCAG ACGGAGGGCC CCTGCCAGCG
AGTGAGGCCA CCACATTGTT CTCTGCGGTT GCCTATCGAC TTCGCCTCAA AGATCCTTCC
GGGACTGTCA CGAAGTCGGA GATGCGCAAA CTGATCGTAG AGTCAATGAC AGACGAAGAT
GTTCTCGGCT ACGACCTAGC GGAAGCTCGC AGGTTGGCCA ACGACGTCCT TACCACCGCC
GAAGATGAGT TCGGTTTGAT CGTCTCATAT GGTGCTGGCA CGTACAATTT CCTACACCGG
ACTCTGCTTG ACCACATGGC TGGTCAGTAT CTCGTGACGC TACCTCCTCA CGCACAATCC
GAGGCCGTAC AACAGTTTGT CGGTGATCCG GCATGGCGCG ATGTACTCCT CGCACTGTTG
AGCGCTCAAC TCAGTTCGCA TGGAACGGAG TTGCTTCTCG CTGCGGCGCT TGACGCCGGA
GAGCGGATGT GGGGAGATAT CGAAGGTTAC GAGCTTCTCG CCGAGGCCCT CGCCGCCGGT
GTCAAACTCA CGCCGAAATC CCAAACCCGA TACATCAACA ACCTGGTAGA ACGGGTCGAA
ACCCACCCAT CGCTACATCA TCGGGCAAAC CTCATTGCGG CTCTAGTCGG CATGCTTACG
AATCAACTCG CCCGAAAGAA CCTGCTTCCG GCCATGAAAC GGTGGCTTAC TGCTCCTCGC
CCTAACCCTG CAGCAACCAT GTGGGCACTG CGCGAACTGC CCATTGCTGA CGAGTGCGCG
CTCAAACACC TGGTATGGGG CCTGCGGCAT CCGGAAGACC GTGTGAAGGT CAACGCAGCC
TTGGCCATCG CGCAGCGCTT CAAAGGTCAG ACACACTTGA TTGACCGGCT GGTATCTCTT
GCCCAAACCG GACCATCCTC GGCAACCCAG GCCGCTGTCA TCCTGGCTCT CGGCACCGGT
TGGGCAGAGG CTACCGAAAC TTCTGGCTTG ATTGACTGGG CCCGGAGCCA GCCTTCAGTG
CCGCTGCGCC TGGTCGCATT GCATCTACTG CAAAAATCCA CCACGAACGG TGAAGCTGCA
CTGTTTCGCC CAGAAGAACG CGCCTGGCTG CTGTCCCTCC TGCACTACGA GAATTGGGCC
CGCGGGCCGT GGCCCGCAGA TGACCTTGTT GACATCGCTG CCACCGGAGA CGTCCAAGTC
GCCGATTTCG CGCTAGAAAC CCTGACCACA AACGGACGAA ACGGCGGCGA CCGCCGTATT
GCGTGGACGC TTGCCTGTAA CGAGTTCGCC GACGATAGCC GATTCAAACA ATGGACCGTA
GCGGAACTCG CCCAGCCGGA GGAACGGGGT CTTATCCTAT ATGACCCCAA CATAATTCCC
CAACAGTGGA TCGACGATCC CGAATTTACC TCAATACTTC GCTCGTACCT AGAAACGAAA
ATTGGAGAAC CCGGCGCATA CAGTGTCGCG AGACTCGCCA CCGCCTTGCC GCCGGAAGAT
GCCAAGGCGG TACTACTGCA AGGGCTGAAT TCTTGGCGGC CGTACTCTGC AGCGCGACAA
CTAGTTGAAC AGTACCTAGA TGACGAGCAG GTCAGCACGG CTCTGATCGC ACGTCTTCGC
GGCGAGTACG AACGCGCCGC GCCATTGGCA AGCATTGCCG TCGACGTGCT TGGACCGAAA
GAAGGGTTCG GTCTTCAAGT GTCCCTGCTT CGCCAGCAAG ACCAAACTAC GAGTTCGGAG
AAGCGCGTTG TTGTGGCACT GGCGGTGGCC GACGCATGGA AACAGTTTAA AGACGAAGCC
CGAAAAGTAG GCGTCAAAGG GCAAACCGCA CGCGACTTGC TAGCAAGCTA TGACGCAACC
GAGCTAGCGA CGCTGTGCAC TGCGGTGAAA CCTCACCCCT TGATGTGGCA CGTCCCCTCC
GTAATAACCG CCTGGCCAGA ACAGGCAACA GTTCTGGAAG TCGCCGACAA CCTCCTATAC
GATGAAAGAC CCATTACATC AGGTATATCC GACACAATTC CAGTCGCAAT ACTTCAGGCG
TTCTGCAAAA GAACCGACGA ACCCTCCCAA CGAATCTTCA ACAAGGGACT CGACCTCCTA
ACACATCTGG AACCGGAGTT GCGCGAAGTA TTGGCCTTCG AACTAGCACG CAGCATGCTA
GCTGCAGAAG AGCACATCAA CGTCCTGTCG GAGTGGCGAA CCGAGCCCGA CACCGAAGTT
CGGCGCATTG CCTTTATCGG CCTCGTTCAA GCCATCAAGA ACCACCAGCA GCACAGTGAA
ACCACAACTG GTGCCGATAC ACCGACCTCT GAAATGGAAT GGCTGCGCCT CGAAATTAAG
CACGACCTTT GCGCCTATGG ACCGCAACTC GAAGAACATC GACAACTTGC ATGGATAGGA
ATGCTCATGC TTGGAGACCT CACGCTCTTC GACAACATCC AGGAATCCAT CGGTCATTCG
GGTCAGATAC CAGGGGTGAG TCTTCGCCTC CCCTATCGTG ATGAAAAGGA CCAGATCCTG
GTGGATCTTG TGGCAGAGAA CTGGGTAGAA CTGTGCGATC ATTTCGGCAA AGACATCTTC
GATCGACTTA TCAGTACGTC TGATCGGCAA CGTCTAACTA AGCGCCAACG ACGCCGAGCA
GTCATGTCAG CGCTCGTGAC CGTCGCCTCC AGATACCCTT CGATCGCGGA GATGATCCGA
GGTGACGCCG GCGCTGATGT TGAACTACGC CACGATCAAA ACTTCTTGCT GTGGGCGAAG
GAAGAAAACC AGGGCAACGT GGAGGTACTC CGCGCCCTAG TTAGCAAACT TGGCGAAAAT
GCGCATCGAC GACAAGACCC AATCGTAGAC TCGTTGCTAG ACAGAGAAAG CTGGAATGTC
TCCGATGAGG ACTTCAAAGC CGCATTTACT GAAGGCGCGA GTCCACGCCC CTTCTATAGC
AACAACAAGC TAGCCATATA TACACATATG TTTCCGGGAG ACAACATTTC CAAAGCTGTC
TTCCACGAGC TTGAATCGTG GTTCCAAACC GAACCTTCGA CACGGAGGTA CCGCGATTTG
TCGGAGGTAC TGACCCTCGC GCTCAGCGTA GCTTCACCAC AGGATTTGCC CGCCATCTTG
CTCCGCGCCC ACGCTCGCAT CCACATGGGC ATATCCGACC TATTCCTACC AATCCTGACA
CGGCCACTGA CACGCCGCCT GCAAATAGAC CTTGAGGCAG TCGAAGCCTT CAAATCCGCG
CTCGCTGAGC CGATGGCCAT CCACGAAACC AGTCCGATAC TCGCCAACGC CGACGATCCG
ATCATCGCCG CAGATCCAGA TCTGCAACCG CTACAACGCA TGTACCTCTT TGCCATCGCC
TTGAAGCGGG CTGGGGCTCT CGCACAGCAC GAAGCGACAG CAATCAGCCA TCTATTGGCG
TCCGCTTCAC CTAACACCAT CGTGCACAAC CCCTTCACCA ACCATGAAGG ACCTCTTTGT
CTCGCCGCAC TGGACCTCAT CTCACGCTGA
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| Protein sequence | MSNVGIANSK DRVEALLWAA PTGPVPAPPV DTKSQVLPVR ELDWSDAERL FLRLLHTVQP
VQFAKLFGVP GQSQAGIDAY ARLPLDLTDS ETNARDYITL QSRRVEELTA AKVEKAIDDF
VAGEWCSKTS VFYYATSFDL QHTKLDEVIR KQTSRLARMG ITFVPWGVQE TSALLKDHPR
IVYDFFGKPW VERFCGMEAA RSLDEHLSLQ DRRTLRSELR SLYQAVFYSQ GSGPSADQTE
YAKRFIVLGV APYRERSVVE QDGSQARDER LRPDQGLADG EAYVESQPGI ERQSFRSARH
LLRSAIGNPT HPVDTVEADE WLTDGKYRLL VGRPGAGKSS LLRFVATDLL SPQPQSIPLQ
REHAPDLPIW LPFGYLCRHL EASTENSVVS AMEAWLKAHS ADHLWPLVKH ALRDDRLLLL
VDGVDEWSNI GAAEQALGKL ETFLGQTKAS AILSTRPYAL HRLNWRLPWG KAEITLLNDQ
QRLTIASQLL IPDTLEKSKS SNPLPWVGVE PFLAQLSATA ELNDLSRTPL FLSLLATTWQ
GEPLPQQRFR IYDHLVELLV GKHPQMRRRA SHADGGPLPA SEATTLFSAV AYRLRLKDPS
GTVTKSEMRK LIVESMTDED VLGYDLAEAR RLANDVLTTA EDEFGLIVSY GAGTYNFLHR
TLLDHMAGQY LVTLPPHAQS EAVQQFVGDP AWRDVLLALL SAQLSSHGTE LLLAAALDAG
ERMWGDIEGY ELLAEALAAG VKLTPKSQTR YINNLVERVE THPSLHHRAN LIAALVGMLT
NQLARKNLLP AMKRWLTAPR PNPAATMWAL RELPIADECA LKHLVWGLRH PEDRVKVNAA
LAIAQRFKGQ THLIDRLVSL AQTGPSSATQ AAVILALGTG WAEATETSGL IDWARSQPSV
PLRLVALHLL QKSTTNGEAA LFRPEERAWL LSLLHYENWA RGPWPADDLV DIAATGDVQV
ADFALETLTT NGRNGGDRRI AWTLACNEFA DDSRFKQWTV AELAQPEERG LILYDPNIIP
QQWIDDPEFT SILRSYLETK IGEPGAYSVA RLATALPPED AKAVLLQGLN SWRPYSAARQ
LVEQYLDDEQ VSTALIARLR GEYERAAPLA SIAVDVLGPK EGFGLQVSLL RQQDQTTSSE
KRVVVALAVA DAWKQFKDEA RKVGVKGQTA RDLLASYDAT ELATLCTAVK PHPLMWHVPS
VITAWPEQAT VLEVADNLLY DERPITSGIS DTIPVAILQA FCKRTDEPSQ RIFNKGLDLL
THLEPELREV LAFELARSML AAEEHINVLS EWRTEPDTEV RRIAFIGLVQ AIKNHQQHSE
TTTGADTPTS EMEWLRLEIK HDLCAYGPQL EEHRQLAWIG MLMLGDLTLF DNIQESIGHS
GQIPGVSLRL PYRDEKDQIL VDLVAENWVE LCDHFGKDIF DRLISTSDRQ RLTKRQRRRA
VMSALVTVAS RYPSIAEMIR GDAGADVELR HDQNFLLWAK EENQGNVEVL RALVSKLGEN
AHRRQDPIVD SLLDRESWNV SDEDFKAAFT EGASPRPFYS NNKLAIYTHM FPGDNISKAV
FHELESWFQT EPSTRRYRDL SEVLTLALSV ASPQDLPAIL LRAHARIHMG ISDLFLPILT
RPLTRRLQID LEAVEAFKSA LAEPMAIHET SPILANADDP IIAADPDLQP LQRMYLFAIA
LKRAGALAQH EATAISHLLA SASPNTIVHN PFTNHEGPLC LAALDLISR
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