| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_0454 |
|---|
| Symbol | |
|---|
| ID | 8881636 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 461275 |
|---|
| End bp | 462225 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003509262 |
|---|
| Protein GI | 291297984 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.815425 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0841628 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCACCA TAACCATTGA AGCGCTCACT AAGCGCTACT CGCGAGTCAC GGCGCTGGAT
CAGCTGACCG TGGACGTCCC TGAGGGCGTC TGCGGGTTGG TCGGTGCCAA CGGCGCGGGA
AAGTCCACAC TCATCAAGAT CCTGCTGGGT CTGTCTACTC CCACCGCCGG GCGGGCGAGT
GTCCTGGGGT ACGACATCGC CAGCCACGGG CCGGAGATCC GCCAGCTCGT CGGGTACATG
CCCGAGCACG ACTGTCTGCC GCCGGACGTG TCGGCCGCCG AGTTCGTCAT GCACATGGCG
CGGATCTCGG GGCTGCCGAC CGGCGCCGCC CGGGAACGCA CCGCCGACAC GCTGCGGCAC
GTCGGGCTGA TGGAGGAGCG TTACCGGCGC ATGGGCGGCT ACTCCACCGG CATGAAGCAG
CGCGTGAAGC TGGCGCAGGC GCTGGTCCAC GACCCGAAGC TGGTGTTCCT GGACGAGCCG
ACCAACGGGC TGGACCCGGT GGGGCGCGAC GAGATGCTGG ACCTGATCCG GCGGATCCAC
ACGAAGTTCG GCATCTCGGT GCTGGTCACC TCGCACCTGC TGGGCGAGCT GGAACGCACC
AGCGACCACG TCATCATCAT CGACGGCGGC CGGTTGCTGA AGTCCCGCAG TACCGGGGAG
CTGACCAGCC AGACCCACAC GCTGATCCTG GAGGTGCTGG ATCCGGCCGG GGGCGCGGAC
GCCGCCGACC GGGCGCAGGC GAGCCTGGAG GCCAGCGGGC TGGGGGTGCG CCGGGCCGGG
GAGCTGATGT ACGTGCCCGC CACCGACGAG TCCACTTTCG ATTCCATTCG CGACACCGTC
GCGCACGCGG GGCTGGGGCT GGTGCGGTTG CAGCGCGACC GGCACCACAT CGCCGAGATC
TTCGCCGAGA ACACGCCCGA AGGGAGCCAG GACCATGTCG TCACCGGTTA A
|
|---|
| Protein sequence | MSTITIEALT KRYSRVTALD QLTVDVPEGV CGLVGANGAG KSTLIKILLG LSTPTAGRAS
VLGYDIASHG PEIRQLVGYM PEHDCLPPDV SAAEFVMHMA RISGLPTGAA RERTADTLRH
VGLMEERYRR MGGYSTGMKQ RVKLAQALVH DPKLVFLDEP TNGLDPVGRD EMLDLIRRIH
TKFGISVLVT SHLLGELERT SDHVIIIDGG RLLKSRSTGE LTSQTHTLIL EVLDPAGGAD
AADRAQASLE ASGLGVRRAG ELMYVPATDE STFDSIRDTV AHAGLGLVRL QRDRHHIAEI
FAENTPEGSQ DHVVTG
|
|---|
| |