| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_0446 |
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| Symbol | |
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| ID | 8881628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 454311 |
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| End bp | 455516 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_003509254 |
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| Protein GI | 291297976 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.871786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.459695 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCAG GGCTCGACAC CGCCGACATC ACGAGCAGGG TGAACCGCTA CGTCGATGTC
GGACGCCACG CCGAGGCCGA GCGGATCGTC CGACGAGCCC TCCATACCGA TCCCGGCAAC
ATCTCACTGC TCAACGATCT GAGCTACACG CTGTACAAGC AGAAACGCCA CGACGAGATG
CTGGAAGTCT GCCGGACCGC GCTGGCGATC GAACCGGACT CACCCGACAT GCTGCAACGG
CTGGGACTGG CCCTCGAAGC ACTCGGGCGC CGCGCCGAAG CCATCGAGGC GACGTCCCGG
GGCCTGGAAC AGGCACCGGA CCACCACTAC CTGATGCGCG ACCACGCGCA CCTGCTTCTC
CTCGACGGCC TGAACCACGA AGCGGTCGCA GGATTTCGCC GAGCTCTGGA GGTGTACCCC
GACGACGCGG TACTGATGGG CCTCCTCGGC GACGCACTGC TGCAAGTGGA CGAATTCCGC
GAAGCCCACG AGCTGCTCAC CGCGTCACTG GCCGACAGGC CCGAATCGGC AGACGCGTTG
CTGTCACTGG GAACCGCTCA GATGTTCCTC TTCCACGTGC GCGCCTCGCT GAAGACCCTC
GCCCTGACGG TGAGAGCCGA TCCCGACGAC GCCCGACGCT GCGCGGTCGT CCGCTACCTG
ATGGCCTGGC CCATCAGCCA CATCTACTCC GCTCTCCGGT GGTCCCTCCC GGCGGCAGCC
CTCGCCGCGT TGACGGCGAG CCTGCTGGGC ACCACCGACT GGCTTCAGTG GACGATCACT
GGCTTCACGT TCGCGGCGTT CGCCTATTCG GCGCACTGGT TCGCCCGGGG CGGCCTCCCC
GCCTGGCGAG CCCTGTTCCG GCTGCCGCCC GGCGAGATCG CCCTGACGGC AACCGGCATC
GGCCTGGGTT ACGGCGGCTG CGTCGCCGTC CTGGCGGCGA CCTGGCTGTC CAGCCCGCTG
CTGGCAGGCA TCGGCCTCGC GGCAACAGCT CTCATGTGGA TCGTCGAAGC GGTCGAATGG
TCCCTGGATC CCGACGAGGA CCAGACCGTC CCGCTGCACC GCCGCACGCT GGCCAACCTG
CGCCCGATCG TCAAGGACGA CCTGACCGTC CTGAAGCAAC TGCGGGCCCG CCGCGAACTG
CGCCGCGCTC GCGCGACTGC CGCGACCGAG CCGTCGCGCC AGGCCAGCAG CCAGCCTCCT
CGCTAG
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| Protein sequence | MTSGLDTADI TSRVNRYVDV GRHAEAERIV RRALHTDPGN ISLLNDLSYT LYKQKRHDEM
LEVCRTALAI EPDSPDMLQR LGLALEALGR RAEAIEATSR GLEQAPDHHY LMRDHAHLLL
LDGLNHEAVA GFRRALEVYP DDAVLMGLLG DALLQVDEFR EAHELLTASL ADRPESADAL
LSLGTAQMFL FHVRASLKTL ALTVRADPDD ARRCAVVRYL MAWPISHIYS ALRWSLPAAA
LAALTASLLG TTDWLQWTIT GFTFAAFAYS AHWFARGGLP AWRALFRLPP GEIALTATGI
GLGYGGCVAV LAATWLSSPL LAGIGLAATA LMWIVEAVEW SLDPDEDQTV PLHRRTLANL
RPIVKDDLTV LKQLRARREL RRARATAATE PSRQASSQPP R
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