Gene Snas_0420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0420 
Symbol 
ID8881602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp428208 
End bp429953 
Gene Length1746 bp 
Protein Length581 aa 
Translation table11 
GC content71% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003509230 
Protein GI291297952 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGAGA ACCGGCTTCC GTTGGCGGAC AAGCGACAGG TGCGCCGGGC CGCGTGGGCC 
CTGCTGCGCG GCGACGCCAA GGCGCTGACG ATGGTGATCG TCCTGTACTG CCTCGCGGCG
GTCGCGGGGC TGGCCGCGCC ATGGCTGCTG GGCGAGATCG TCGATCGCGT CGACTCCGGC
GCCGGTATCG GAACCGTCGA CATGCTCGGC CTGGCCATCG CGGGTTTCCT GCTGGCGCAG
CTGTTGTTCG ACAGGTTCGG GCGCTACCTC GGGTACCGGT ACGGGGAGCG GGCATTGGCC
CGGATGCGTG AGGACTTCAT CGACGACACG CTCCGGCTAC CCGTGTCCGT TGTGGAGCGG
GCGGGTAGCG GCGACCTGAT GACCCGCAGC ACCGGCGACG TCAACACGCT GGGAACCATT
GTCCGGCAAG CACTCCCCGA GATGGTGATC GCCGCCGCGC ACATCGTTTT CATCCTCGGC
GCTGTCATCG TCCTCAACCC GCTGTTCAGT CTGTGCGCGC TGCTGATGAT CCTGCCGCTG
TGGCTGATCA TGCGCTGGTA CCTGCGCCGG GCCCGCTCCG CCTACCTCGC CGAGGGCGAC
GCCAACACCG AGATGTCCGA GGTCATGGCC GCCACCGCCG CCGGGGCCAA GACCGTCGAG
GCCTTCGGTC TGGCCGACCG CCGCGTCGCC GCCGGGGACG CCACGGTCGC CGAGGGCACC
CGCACCCGCC GCAAGACCCT GTGGCTGCGC ACCGTCATGT TCCCGGTCGC CGACTTCTCC
TACGTGCTGC CGATGGCCGC CGCGCTGTTC TTCGGCGGCC TGCTGTACTT CAACGACGTC
GTGAGCCTCG GCGTCGTCAT CGCCGCCTCG CTGTACCTGC GGCAGCTCGT CGAACCGCTG
GACCAGGCTC TGATGTGGAT CGAGCAGTTG CAGCAGGGCG GTGCCTCGTT CGCCCGGGTC
CGCGGCGTCG CCGAGGTCGA ACCCGACCGC GTCCCCTCCG GCGACGAACC CGTCGGCGAC
ACCATCGAGG TCACCGGCGT CCACTATGCC TACACCTCGG GACGCGATGT CCTGCACGGC
ATCGACCTGT CGGTGCGGGC CGGGGAACAC CTGGCCGTCG TCGGTCCCTC GGGGGCAGGG
AAGTCCACGC TCGGACGGCT GCTGGCCGGA GTCGACGCTC CCCGCGTCGG CGCGGTGAAG
GTCGGCGGCG TCGCCGTCAC CGACCTGGAC CAGGCCGAAC TGCGCCGCCG CATCGCACTG
GTCACACAGG ACCATCACGT GTTCATCGGT ACCGTGCGCG ACAACCTGAT CCTCGCCAAA
CCCACCGCCA CCGACGACGA GGTGCTGTCC GCCCTCGGCA CCGTCGGCGC CACCTGGCTC
GACACCCTCC CCGAGGGCCT CGACACCCAG CTGGGCGCCG GTCACACCGA ACTGGACGCC
CCGCAGGCCC AGCAGATCGC GCTGGCCCGA CTCGTCCTCG CCGACCCGCA CACGCTGATC
CTGGACGAGG CCACCTCGCT GTTGGACCCG ACCGCCGCCC GCGAGGCCGA GCGCGCGCTG
GCCGCCGTCC TGCACGGCCG CACCGTCATC GCGATCGCGC ACCGGCTGCA CGCCGCCCAC
GACGCCGACC GGGTGGCCAT CGTGGACGGC GGACGCATCA CCGAACTGGG CAGCCACGAC
GAACTCGTCG CCGCCGGTGG CTCCTACGCC GCGCTGTGGC GCTCCTGGCA CGGCGAGACG
GACTAG
 
Protein sequence
MNENRLPLAD KRQVRRAAWA LLRGDAKALT MVIVLYCLAA VAGLAAPWLL GEIVDRVDSG 
AGIGTVDMLG LAIAGFLLAQ LLFDRFGRYL GYRYGERALA RMREDFIDDT LRLPVSVVER
AGSGDLMTRS TGDVNTLGTI VRQALPEMVI AAAHIVFILG AVIVLNPLFS LCALLMILPL
WLIMRWYLRR ARSAYLAEGD ANTEMSEVMA ATAAGAKTVE AFGLADRRVA AGDATVAEGT
RTRRKTLWLR TVMFPVADFS YVLPMAAALF FGGLLYFNDV VSLGVVIAAS LYLRQLVEPL
DQALMWIEQL QQGGASFARV RGVAEVEPDR VPSGDEPVGD TIEVTGVHYA YTSGRDVLHG
IDLSVRAGEH LAVVGPSGAG KSTLGRLLAG VDAPRVGAVK VGGVAVTDLD QAELRRRIAL
VTQDHHVFIG TVRDNLILAK PTATDDEVLS ALGTVGATWL DTLPEGLDTQ LGAGHTELDA
PQAQQIALAR LVLADPHTLI LDEATSLLDP TAAREAERAL AAVLHGRTVI AIAHRLHAAH
DADRVAIVDG GRITELGSHD ELVAAGGSYA ALWRSWHGET D