| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_0390 |
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| Symbol | |
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| ID | 8881572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 394573 |
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| End bp | 396084 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | |
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| Product | Glycoside hydrolase family 20, catalytic core |
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| Protein accession | YP_003509200 |
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| Protein GI | 291297922 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.584277 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGTCTTC TTCGCATCCC CACCGCCTGC GTCATATTGG CCACGGCACT GTTCATTCCC
GGCAGTGCCG TGGCCGATCC GTCCCACGCC AAAGCCGCCA CCCCTTCGAC GATCCCCGCA
CTCGGCGAAT GGACGGCGGC GTCCGGCACC TACACCTACT CCGAGTCCAG CCGTCTGGTC
GTCGACCCCG ACCACGCCGA CGAACTGACC GACGAAGCCC AGACCGCCGC CGCCGACCTG
GCGGCGCTGA CCGGCACCGA ACCCGAGGTC GTCACCGGTG AGCCCGAGAC CGGCGACGTG
TCGCTGGCGC TGGGTGGCGG CGAACCGCTG GGCGCCGAGG GTTACAGCCT CGACGTCGGC
GACACCTTCG CCATCACCGC CAACGCCGAC GCGGGCGCCT TCTACGGCAC CCGGACGCTG
TTGCAACTGG TGAAGCAGGA CAAGCAGATC CCGGCCGGTA CCGCCACCGA CGTCCCGAAG
AAACCCGAAC GCGGCCTGAT GGTCGACGTC GGCCGCAAGT ACATGTCCGT CGAGTGGCTC
AAGAAGCACA TCAAGGACCT GTCCTACGCC AAACTCAACT ACTTCCACCT GCACCTGTCC
GACACCTTCG GGTTCCGGCT GGAGAGCGAG ACCCACCCCG AGGTGACCTC CGAGGACCAC
TACACGAAGG CCGAGATCCG CGAGCTGGTC GACCTGGCCG CGAAGTACCA CGTGACGCTG
GTGCCCGAGA TCGACGTGCC CGGTCACGTC AACGCGATGC TCGCCCAGCA CCCGGAGTTG
CAGCTGGAAG ACCAGTCCGG CAACAAGGAC CCGTACTTCC TGGATCTGTC CAATCCGGAC
GCGTACACGC TGGTGGAGGA CCTGATCAAG GAGTACCTGC CGCTGTTCCC GGGACCGTAC
TGGCACATCG GCGCCGATGA ATACGTCGGC GACTACGGGA AGTACCCGCA GCTGGAGGCC
TACGCCAAGG AGCACTACGG TCCCGACGCC GTCGGCAAGG ACGCGTACTA CGGCTTCATC
AACTGGGCCA ACGAGATCGT CCGTGACGGC GGCAAGACCA CTCGCATGTG GAACGACGGG
ATCAAGGAGG GCGACGGCAC GATAGCGCCC GAGGCGAACA TCGTCGTCGA CTACTGGTCC
ACCCACGGCA TCGATCCGCA GAAGCTGCTG GACCGTGGCC ACACGGTCAT GAACGCCAGC
TGGACCCCGA CGTACTACGT GCTGGGCGGC ACCGACATCG ACCGGCGCTG GCTGTACGAG
GACTGGAACC CGGACCTGTT CGAGAAGACG CTCACCATCG ACGATCCGAA GCGGAACCTG
GGCTCCAAGA TCCACGTGTG GTGCGACCAC CCCGACGCCC AGACCGAGGA CCAGATCACC
GAGGGCATCC GGCTGCCGCT GCGCGGCCTG GCCCAGCAGA CCTGGGGCTC GCCGAAACTC
GTCGAAGGCT ATGACGACTT CGTGGCCATA GACGACGCGA TCGGCCGGGC TCCGGGCTTT
TCATCTTTGT AG
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| Protein sequence | MRLLRIPTAC VILATALFIP GSAVADPSHA KAATPSTIPA LGEWTAASGT YTYSESSRLV
VDPDHADELT DEAQTAAADL AALTGTEPEV VTGEPETGDV SLALGGGEPL GAEGYSLDVG
DTFAITANAD AGAFYGTRTL LQLVKQDKQI PAGTATDVPK KPERGLMVDV GRKYMSVEWL
KKHIKDLSYA KLNYFHLHLS DTFGFRLESE THPEVTSEDH YTKAEIRELV DLAAKYHVTL
VPEIDVPGHV NAMLAQHPEL QLEDQSGNKD PYFLDLSNPD AYTLVEDLIK EYLPLFPGPY
WHIGADEYVG DYGKYPQLEA YAKEHYGPDA VGKDAYYGFI NWANEIVRDG GKTTRMWNDG
IKEGDGTIAP EANIVVDYWS THGIDPQKLL DRGHTVMNAS WTPTYYVLGG TDIDRRWLYE
DWNPDLFEKT LTIDDPKRNL GSKIHVWCDH PDAQTEDQIT EGIRLPLRGL AQQTWGSPKL
VEGYDDFVAI DDAIGRAPGF SSL
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