Gene Snas_0306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0306 
Symbol 
ID8881485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp318176 
End bp318865 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content69% 
IMG OID 
ProductNUDIX hydrolase 
Protein accessionYP_003509117 
Protein GI291297839 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGTCA CGCATGCTTT TTTCTCGGTG ACCGTCGACC TCGTCGTGCT GACCGTCCAG 
CGGGAGACGC TGTCGGTCCT GCTGATCAAG CGGGCGTTTG ATCCCTTTAA GGACAGTTTG
GCGTTGCCGG GCGGTTTCGT GACCGAAGGC GAGGACCTCA TGGCGGCGGC CTCCCGGGAA
CTGGCCGAGG AAACCGGACT GTCCACAGCC GAAGGGCACC TGGAACAGCT GGCCACCTAC
GGCACCCCGG ACCGTGACCC CCGGGGCCGG GTCGTCACGG TGGCCTACCT GGCGCTGTTG
CCCGACCTGC CCGCCCCCCG GGCCGGCTCG GACGCGGCAG CCGCCGCCTG GCACCCGGTA
CCGTCCCTGT TGGACAAAGA GGACGTGCTC GCCTTCGACC ACCACCGCAT CCTGTGCGAC
GGCGTGGAAC GAGCCCGCGC CAAACTGGAG TACTCCTCAC TGGCGGCCGA GTTCTGCCCG
CCCGAGTTCA CCATCGCGCA ACTGCGACGC ATCTACGAGG CCGTCTGGGG TGCCACAGTA
GACCCGCGCA ACTTCCACCG CAAGGTCACC GGCACGCCCG GCTTCGTCGT CGCCACCGAC
AACTACACCG ACGGCGACCG GGGCCGCCCG GCCCGGCTGT ACCGGCGCGG CCCCGCCAGC
TCCCTACACC CGCCCCTGCT GCGTCGCTGA
 
Protein sequence
MPVTHAFFSV TVDLVVLTVQ RETLSVLLIK RAFDPFKDSL ALPGGFVTEG EDLMAAASRE 
LAEETGLSTA EGHLEQLATY GTPDRDPRGR VVTVAYLALL PDLPAPRAGS DAAAAAWHPV
PSLLDKEDVL AFDHHRILCD GVERARAKLE YSSLAAEFCP PEFTIAQLRR IYEAVWGATV
DPRNFHRKVT GTPGFVVATD NYTDGDRGRP ARLYRRGPAS SLHPPLLRR