| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_0283 |
|---|
| Symbol | |
|---|
| ID | 8881462 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 295938 |
|---|
| End bp | 296678 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | YP_003509094 |
|---|
| Protein GI | 291297816 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAAAA TCCGCCACCA ACCGACGGCA CCCACCCTCG CCCGGCAACT GGCCCCGGGC
GATGTCATCG ACGCGCACCG ACACGACGAC CACCAGATCG TCTACGCCGC CCGCGGTGTC
CTGGCCATCA CCACCGACAA GGGCAGCTGG ATCGCCCCGG CCACCCGCGC CATCTGGGTA
CCGGCGGGCA CCACCCACGC GCACCGCGCC CACGGCGACC TCGAACTCCA CCTCGTCGGC
CTGCCCGCCC GCGACAACCC GCTCGACCTC GCCGAACCCA CGGTGCTGGC CATCGGCCCG
CTGACCCGGG AACTGATCCT CGCCTACACC CGCAGCCCCG CCGACGACAG CCCGGAACGC
GCCCGCCTGC GCGCCGTCCT GCTCGACCAG CTCCGCGCCA CGCCCCAGCA ACCGATCCAC
CTGCCCACCC CCACCGATCC CCGACTGTCC GAACTGTGCG ACCGGCTGCG CGCCGACCCC
GCCGACAACA GCACCCTCAC CGTCCTGGGC CGCCGCGTCG GCGCCAGCGA ACGCACCCTG
TCGCGGTTGT TCAAAACCGA ACTGGGCATG ACCTTCCCGC AGTGGCGAAC CCAGCTGCGG
CTGTACCACG CCCTGGTCCT GTTGGCCGAC AACGCTTCCG TCACCGCCGT GGCCCACACC
TGCGGCTGGT CGTCCACAAG TGCCTTCATC GACGCGTTCC GCCGCGCCTT CGGCCACACT
CCCGGCGCCC ACCAGCGGTG A
|
|---|
| Protein sequence | MPKIRHQPTA PTLARQLAPG DVIDAHRHDD HQIVYAARGV LAITTDKGSW IAPATRAIWV
PAGTTHAHRA HGDLELHLVG LPARDNPLDL AEPTVLAIGP LTRELILAYT RSPADDSPER
ARLRAVLLDQ LRATPQQPIH LPTPTDPRLS ELCDRLRADP ADNSTLTVLG RRVGASERTL
SRLFKTELGM TFPQWRTQLR LYHALVLLAD NASVTAVAHT CGWSSTSAFI DAFRRAFGHT
PGAHQR
|
|---|
| |