Gene Snas_0275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0275 
Symbol 
ID8881454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp289132 
End bp289752 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content68% 
IMG OID 
ProductHemolysin-type calcium-binding region 
Protein accessionYP_003509086 
Protein GI291297808 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCACCC CTCCCACCCT GCGCTCCAGC CTGCGCATCG TGGCCCGCGC CTCGCTGGTC 
GCCACGCTCG CGGCCGTCGG CGTCGCCGCG TCCGCCTATG GCGCCTACGC CAGCTCCCCC
GAGCCGGAGT CGTTGCAGTG CACCCTTTCC GGCACGGCGA GCTCCGACAC CCTCTTCGGC
ACCAACGGCG ATGACGTCCT GTGCGCCTTC GGCGGCAACG ACGTCATCTA CGGCGCCGGT
GGCAACGACA TCATCCTCGC CGGGGCCGGA GACGACCAGG TGTTCGGCCA GGGCGGCATG
GACACCATCT ACGGCGAGGG CGGCTACGAC GTCATCTACG GCGGCAACGG CGCCGACAAC
GTCTACAGTG GCGCCCAGGC CGACCAGATC TATGGCAACA ACGGTGCCGA CACGCTCTAC
GGCCAGGGCG GCAACGACGT CATCCGCGGC CAGGCCGGGG ACGACTACCT CGTCGCCGGT
AACGGCAACA ACTGGCTGTA CGGCGGCAAC GGATTCGACA CCCTGCACGC GGCCAACGGC
TACATCGACC ACGTGGACGG CGGTGCCGCC TACGACACCT GTTACTTCGA CTACTTCGAC
TCCGTCGTGA ACTGCGAGTG A
 
Protein sequence
MFTPPTLRSS LRIVARASLV ATLAAVGVAA SAYGAYASSP EPESLQCTLS GTASSDTLFG 
TNGDDVLCAF GGNDVIYGAG GNDIILAGAG DDQVFGQGGM DTIYGEGGYD VIYGGNGADN
VYSGAQADQI YGNNGADTLY GQGGNDVIRG QAGDDYLVAG NGNNWLYGGN GFDTLHAANG
YIDHVDGGAA YDTCYFDYFD SVVNCE