Gene Snas_0252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0252 
Symbol 
ID8881431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp266375 
End bp267040 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content71% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003509063 
Protein GI291297785 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACCG ACGAGGTCAT TTGGCTGCGT CCCGAGCAGG CCACCACCGG CCGCCCCGCC 
GAACGCAGCC GCGCCGAGAT CACCGCCGCC GCCATCACCG TGGCCGACCG CGACGGCCTG
GACGCGGTGT CGATGCGCAA GGTCGCCGCC GAACTGGGCA CCGGCGCCGC CTCGCTGTAC
CGCTACGTCA ACAACCGCGA CGACCTGCTC GACCTCATGG TCGACGCCAC CGGCGCCGAC
TTCGAGTTCC CGCCCCCCAC CGGCAAACCG GTCACCGACC TGGTCCAGCT CGGCGTCCGG
CACCGCCAGA TCATGCTGGG CCACCCGTGG CTGCCGACCC TGGTCCTGAC CCGCCCGACG
CTGGGCCCCT CCGGCGCGGC CATCCTTGAG TACTTCCTCA CGGTGCTGGA CGACCATCCG
CTGCCCGCCA CCGCGAAACT GGAAGCCTTC GCGCTGTTCA GCGGCTTCGT GGCCATGTAC
GTCCACAACG AGACCCACAC CGCCGCCGAG ACCGTAGCCC GCCAGACCAC CTACCTGCTG
CACCTGGCCA CCGACGGCGA GCACCCCCAG CTCGCGGCCA CGCTGCTGGC CGCCCAGCCC
GCCGAGGGCT CCGACCGCTT CCCCGTGATC CTGGCCCGGG TCCTGACCGG TCTGCTGACG
ATCTGA
 
Protein sequence
MSTDEVIWLR PEQATTGRPA ERSRAEITAA AITVADRDGL DAVSMRKVAA ELGTGAASLY 
RYVNNRDDLL DLMVDATGAD FEFPPPTGKP VTDLVQLGVR HRQIMLGHPW LPTLVLTRPT
LGPSGAAILE YFLTVLDDHP LPATAKLEAF ALFSGFVAMY VHNETHTAAE TVARQTTYLL
HLATDGEHPQ LAATLLAAQP AEGSDRFPVI LARVLTGLLT I