Gene Snas_0239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0239 
Symbol 
ID8881417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp254995 
End bp256989 
Gene Length1995 bp 
Protein Length664 aa 
Translation table11 
GC content71% 
IMG OID 
Producthelicase c2 
Protein accessionYP_003509051 
Protein GI291297773 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTAAAC CCACCGTCGC GCAGTTGCTT GACGCCGCCG TCGCGGCCGT TCCCGGTGGG 
GAGATCCGCC CCGGTCAGCA GGCCATGGCC ACCGCCATCG CCGAGTCGAT GGAATCGGGC
ACCCACCTGA TGGTCCAGGC CGGAACCGGC ACCGGCAAGT CGCTGGCCTA CCTGGCCCCG
GCGCTGCTGT CGCCGCGTCC GGTCGTCATC TCCACCGCGA CGCTGGCGCT GCAGTCACAG
CTGATCGCCA CCGACCTGCC CCGGCTGTCC GAGGCCGTGG AACCGGTCCT GGGCCGCAAA
CCCAGGTACG CGGTCTTCAA GGGACGGCAC CACTACCTGT GCGCCGCGAA GATCGGTGCC
GACGCCACCG ACGAGGAGGA CACCCTGTTC TCCGACACCG AGGAGTCCGG CTGGGTCGGC
CAGCGCTCCC GGCTCGGCAA GGACATCGGA CGACTCACCG ACTGGGCCAA CGACACCGAC
ACCGGCGACC GCGACGACCT CGACCCCGGC GTCTCCGACG CCGCGTGGCG GCAGATGTCC
ACCTCGGCCC GCGACTGCGT CGGCGCCGCC AACTGCCGCT GGGGCGGCGA GTGCTTCGCT
GAGGCGGCCC GCAACCGGGC CCGCGAGGCC GACATCATCA TCACCAACCA CGCGCTGCTG
TCCATCGACA TCATGCACAA CCGCACCGTG CTGCCCGAAC ACGATCTGCT CATCGTGGAC
GAGGCGCACG AACTGGCCGA CCGCACCACC TCGGCGGCCC GCGCCGAACT GTCGGCCAAC
AGCGTCGACC GGCTGGGCCG CAGGGCATCG GGCGTGTGCG GCAAGGAGAT CGCCGCGCAG
CTCACCGAGA TCGCCGACCA ACTCGGCGTC GTCATCACCG AATGCCCCAA CACCCGGCTG
GAGGAACTGC CCACCGCCCT GACCGAGGTG CTGACCCTTC TGGACGGTGC CTGCGGCACC
GCGATCGGCG AGATCGGCAA CGTCAAACCC GACTCGCCCG AGTACATGTC CCGCACCCAG
CTGAAGAGCT GGCTCACCGA GGCCCGCGAG ACCGCGCAGC GCTGCCTGGC CGGTGGCCGC
CAGGACGTCC GCTGGTGCGA GGGCGACGGC CGCGGCCGCA GCCTCATCGT CGCGCCGCTG
TCGGTGGCGG GCCTGCTCGG CGAGGAACTG TTCGCCGAGC GCACCGTCAT CGCCACCTCG
GCGACCCTGA CGCTGGGCGG CAGCTTCGAC ACCGCCGCCA CCTCGCTGGG TCTGAAGAAG
GAGAACGAGG TGACCGAGGC CGACAAACCC TCGGGCACCA ACACCGGGCC GATGTGGCGG
TCCATGGACG TCGGTTCCCC CTTCGAGTAC CGGAAACAGG GCATCCTCTA CGTCGCCGCG
CACCTGCCCC GCCCCACGGC GTCCGGGCTG TCGGACGCGG CGGCCGACGA ACTCATCCGG
CTGGTCACCG CCCTGGACGG CCGGGCCCTG GGCCTGTTCT CCTCCAAACG CGCCGCCACC
ACCGCCGCCG AGGTGCTGCG CGAGAAGACC GACCTGCCGA TCCTGTTGCA GGGCGACGAG
ACGCTTCCGT TGCTGGTCAA GAAGTTCAAG GCCGATGCAC GAGCGTGTCT CCTGGGCGTC
ATGTCGCTGT GGCAGGGTGT GGACGTGCCT GGTGACGCCT GCCAGCTGGT CATCGTCGAC
CGGTTGCCGT TCCCGCGACC CGACGAACCG CTGTCGGCCG CGCGTTCGGC CGCCGCCGAC
GAGGCGGGCG GTTCCGGGTT CGCGTCGGTC AGCGTTCCGC ACGCGGCGAT CCGGCTGGCG
CAGGGCGTCG GACGGCTGAT CCGCACGGGC GGTGACCGGG GCGTCGCCGC CGTCCTCGAT
CCCCGACTTC ACACCGCCCG TTCCTACGGT CCGTACTTGC GAAAGTCGTT GCCGCCGCTG
TGGTACACCA CTGACAGTGA CAAGGTGCAA GGCGCACTGC GACGACTGGC CGCTACCCCG
GCGGACCTCC GATAG
 
Protein sequence
MSKPTVAQLL DAAVAAVPGG EIRPGQQAMA TAIAESMESG THLMVQAGTG TGKSLAYLAP 
ALLSPRPVVI STATLALQSQ LIATDLPRLS EAVEPVLGRK PRYAVFKGRH HYLCAAKIGA
DATDEEDTLF SDTEESGWVG QRSRLGKDIG RLTDWANDTD TGDRDDLDPG VSDAAWRQMS
TSARDCVGAA NCRWGGECFA EAARNRAREA DIIITNHALL SIDIMHNRTV LPEHDLLIVD
EAHELADRTT SAARAELSAN SVDRLGRRAS GVCGKEIAAQ LTEIADQLGV VITECPNTRL
EELPTALTEV LTLLDGACGT AIGEIGNVKP DSPEYMSRTQ LKSWLTEARE TAQRCLAGGR
QDVRWCEGDG RGRSLIVAPL SVAGLLGEEL FAERTVIATS ATLTLGGSFD TAATSLGLKK
ENEVTEADKP SGTNTGPMWR SMDVGSPFEY RKQGILYVAA HLPRPTASGL SDAAADELIR
LVTALDGRAL GLFSSKRAAT TAAEVLREKT DLPILLQGDE TLPLLVKKFK ADARACLLGV
MSLWQGVDVP GDACQLVIVD RLPFPRPDEP LSAARSAAAD EAGGSGFASV SVPHAAIRLA
QGVGRLIRTG GDRGVAAVLD PRLHTARSYG PYLRKSLPPL WYTTDSDKVQ GALRRLAATP
ADLR