Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_0223 |
Symbol | |
ID | 8881401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 238770 |
End bp | 240560 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | peptidase S8 and S53 subtilisin kexin sedolisin |
Protein accession | YP_003509035 |
Protein GI | 291297757 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.221724 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCTCC CACCCGCCCG GCGCCTCCTG GTGGCCGTCG GCACGGTCAC GGCCATCACG GCCACCACCG TGCTCGCCGG CGCCCCGGCC GCGCACGCGG CCGAAGCCGA GATCGTCAAC AGCGACGCAT CCGGCGTCAT CGAGGACCGC TACATCGCGG TCCTGCGCGA CAGCGCGGTC AAAGCCACCC AGAAGTCGGT CGACGCCAAG GCCGAAACGC TCGCCGACAA GTACCACGGT GAGATCGACC GCACCTACCA CGCCACCATC CGCGGTTTCG CCACCACCAT GGACGAATCC GACGCGAAGC GGCTGGCGGC CGACCCGGTC GTCGACTACG TCGAGACCGT CCGCGAGGTC AAACTGGCCG AGGACCAGAC CAACCCGCCC AGCTGGGGTC TGGACCGCGT CGACCAGAAC AACCTGCCGC TGGACAAGAA GTTCAGCTAC CCGACCCAGG CCGGAGACGG CGTCACGGTC TACGTCCTCG ACACCGGGGT TCGACTGAGC CACCAGACTT TCGGCGGCCG CGCGAAGTCG GGCTACGACT TCATCGACAA CGACGCCAAC GCCTCCGACT GCCACGGACA CGGCACCCAC GTCGCCGGAA CGACCGCCGG AAGCCAGTAT GGTCTCGCCA AGAAGGCCGA CGTCGTGTCG GTACGGGTCC TCGACTGCCA GGGCTTCGGC GACAACGCCC TCATCGCCGA CGGCATCGAC TGGGTCACCG AGCACGCCGT CAAACCGGCG GTCGCCAACA TGAGCCTCGG TGACACCCAG CCCAGCCCGG TCATGGAGGA CGCCGTGCAG CGTTCCATCG ACGCCGGGAT CCAGTACTCG CTGGCGGCCG GGAACAACAG CGGCGACGCC TGCAGTTTCT CCCCGGCGCG GCTGCCCGCG GCCGTGACCG TCGGATCAAC CGCTGAATCC GACGGCCGCA GCTCGTTCAG CAACTACGGC CGCTGCCTCG ACCTGTTCGC GCCCGGCTCG AACATCGTGT CCTCGGCCAA CTCCGGCGAC TCCGGCCAGG CCACCATGAG CGGCACCTCG ATGGCCGCGC CACACGTGGC CGGGGCGATC GCGCTCTACC TGGGACAGAA CCCGAACGCG ACCCCGCAAC AGGTTCGCGA CGCCATCGTC ACCAACGGCA CCGCCGGAAA GGTCACCAAC CCGGGCTCGG GTTCGCCGAA TGTCCTGCTG TACAGCGGTT TCATCAACGA ACCACCCGCC GAGCACGACT TCAGCATCGC CGCCGACCCC GGCTCGGCGA CCGTCGAACC CGGACAGTCG GCCAAGACCA CGGTGTCCAC GAAGGTCACC AAGGGACAGG CCCAGCAGCT GAAACTCTCC GCCACCGGAC TGCCGTCCGG CGCCCAGGCC AGCTTCGACC CGGCCGCCAT CGCCTCCGGC GAGAGCTCAC AACTGTCGAT CGCGACCTCG TCCGGCACCC CCAAGGGCTC GTACCCGGTG ACCATCACCG CCGAAGGCAC CGAAGCCACC CGCACCGCGA GCTTCACGCT CCAGGTAGGA GCCGACGGCG GCAACAAACA ACCGATCGCC GACTTCACCT CGAACTGCTT CGCCGGTATC GGCTACTGCT TCTTCGACGG CAACGGCTCC TCCGACCCGG ACGGCTCCGT CGCCAGCTAC AAGTGGAACT TCGGTGACGG CACCACCGGC ACCGGAGCCG CACCCTTCCA CCGCTACTCA CCCGGAACCT ACAAGGTGAC CCTCACGGTC ACCGACAACA AGGGAGCGAC CGGATCGGTC ACCAAGACCG TCACAGTCTG A
|
Protein sequence | MKLPPARRLL VAVGTVTAIT ATTVLAGAPA AHAAEAEIVN SDASGVIEDR YIAVLRDSAV KATQKSVDAK AETLADKYHG EIDRTYHATI RGFATTMDES DAKRLAADPV VDYVETVREV KLAEDQTNPP SWGLDRVDQN NLPLDKKFSY PTQAGDGVTV YVLDTGVRLS HQTFGGRAKS GYDFIDNDAN ASDCHGHGTH VAGTTAGSQY GLAKKADVVS VRVLDCQGFG DNALIADGID WVTEHAVKPA VANMSLGDTQ PSPVMEDAVQ RSIDAGIQYS LAAGNNSGDA CSFSPARLPA AVTVGSTAES DGRSSFSNYG RCLDLFAPGS NIVSSANSGD SGQATMSGTS MAAPHVAGAI ALYLGQNPNA TPQQVRDAIV TNGTAGKVTN PGSGSPNVLL YSGFINEPPA EHDFSIAADP GSATVEPGQS AKTTVSTKVT KGQAQQLKLS ATGLPSGAQA SFDPAAIASG ESSQLSIATS SGTPKGSYPV TITAEGTEAT RTASFTLQVG ADGGNKQPIA DFTSNCFAGI GYCFFDGNGS SDPDGSVASY KWNFGDGTTG TGAAPFHRYS PGTYKVTLTV TDNKGATGSV TKTVTV
|
| |