Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_0216 |
Symbol | |
ID | 8881394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 230919 |
End bp | 231626 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | GntR domain-containing protein |
Protein accession | YP_003509028 |
Protein GI | 291297750 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.613582 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGATG CGTTGCGCCC CATGTCTCGT CGACGCCTGT ACGAACAGGT CCTCGACCGG CTGCGCGACT ACGGCACCGA GGCTGGGCTG AAGGCCGGTG ACCGGCTGCC GCCCGAACGC GAACTCGCGC AACGACTCGG CGTCAGCCGC GCCTCCGTCA AACAGGCCAT CGTGGTGTTG GAGGTGCAGG GCCTCGTCGA GGTCCGCCAC GGCGGCGGAA CCTACCTGCT CACCGACCGG CTCGACACCG AACCCGTCGA CAGTCTCGTG GAACGCCGGG GCCGCCTGCC CGACGTGCTC GACGCCCGCG AGGCCCTGGA GACCCGGCTG GCCGCGCTGG CCGCCGAACG CCGCACCGAC GCCGACCTGA CCGCGATCGA GCAGGCCCTG GAGTTCATGG CCGCCGAGAT CGACAACGGC GAATACGGCG TCGAGGGGGA CCGTCGCTTC CACGCCTCGG TGACCGCCGC CGCGCACAGC CCGCTGCTGG CGCAGTTCAT GAAGTCGATA GCCGAGAAGA TCACCGAGAG CCGCAACGAG TCGCTGCGCC AGCCCGGCCG TCCCCGCAAG TCACTGGCCC AGCACCACCG CATCCTGGAC GCCATCGCCG AACAGGCACC CGGCAAGGCC GCCGAGGCGA TGCGCCGCCA CGTCCGCACC GTCGCCAAGG TGCGGCTGCT CGACTGGGAC CCCGACAGCG CCGAGTGA
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Protein sequence | MPDALRPMSR RRLYEQVLDR LRDYGTEAGL KAGDRLPPER ELAQRLGVSR ASVKQAIVVL EVQGLVEVRH GGGTYLLTDR LDTEPVDSLV ERRGRLPDVL DAREALETRL AALAAERRTD ADLTAIEQAL EFMAAEIDNG EYGVEGDRRF HASVTAAAHS PLLAQFMKSI AEKITESRNE SLRQPGRPRK SLAQHHRILD AIAEQAPGKA AEAMRRHVRT VAKVRLLDWD PDSAE
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