| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_0196 |
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| Symbol | |
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| ID | 8881374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 208265 |
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| End bp | 211168 |
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| Gene Length | 2904 bp |
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| Protein Length | 967 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_003509008 |
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| Protein GI | 291297730 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.46607 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0345978 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTCC CCCTCGGGCC GTCCAGCGCA TTCGAATCCG CACCGAAAAT CCCCATGGAC
AGTCACATCA CACTCCCCAG CGAACTCCGG CCGGTGCTGG TCAGGCTGCT CGGTCCGGTC
GAGATCGCCG GTGAGGACGG CTGGCAGCGG GGCGGGGCGC CGAAACAGGC GTGCGTGCTG
GCCTGTCTGG CGCTGTCCCC CGGCACCGCG GTGAGCATCG AGACACTGGC GCACCGCGTC
TGGGACGGCC CGCATCCCAC CGAGACCCGC AACATCATCT ACGGCCACGT CACCCGGCTG
CGGCAGTTGC TTAAACCGCA CGACGAGGTC CGGCTGCGGC GCATGGGCAC CTCGGAGTAC
CAATTGGACA TCGAGCCGGA ACTGGTGGAC GCGTGGCGCA TGCGCGACCT GGCGGGCAAG
GCGCGGGCGG TGCAGGCCGG TGGCGACATG ACGACGGCGG CGGAGTTGTG GCGCGGCGCG
GTCGAGCAGT GGCGCGGCCC GGCGCTGGCG GGCATCAAGA CCGAGTGGAG CGCCCGCACC
AGCCGTCGGC TGCGCAACGA CTACCTCGCG GCGGCGGCGG GTTGGAGCGA GTGCCTTCTC
CAGTTGGGGC AGCACGAGGC CGTCGTCGGC AACCTCGAAC CCATTGTGGA GCATCATCCG
TTGGTGGAGA ACCTGGTGGC GCCGTTGCTG TTGGCGCTGT ACCGCTGCGG TCGGACGATG
GACGCGCTCA ACCGTTACAC CGACACCCGC CGCCAGCTGC GCAAGACGCT GGGCAACGAC
CCCGGGGAGC GGCTGCGGAC GCTGTACCAG CGGATCCTGC GCCAGGAACC GGAACTGTTG
CGGGCGCCCG CGACCGAGCG GCGCGAGGCC GCGCCCGCCG CGGTGTCACC GGCACCGGCG
CCGGTGCCCG CACAGCTGCC CGCCCGGGTG TCGGGGTTCA TCAACCGGGA GGCGCAGCTG
GAGACGCTGG ACGCGCAGCT GCCGTCCGCG TCGCTGGTGA CGATCTCCGG CATGGCCGGG
GTCGGCAAGA CGGCGCTGGC GGTGCACTGG GCGCAGCGGA TCGCGTCCCG GTTCCCCGAC
GGGCAGCTGT ACGTGAACCT GCGTGGCTTC GATCCGTCCG GGCAACCGAC CGAACCGGCC
GACGTGATCC GGGGGTTCCT GGACGCGCTG GCCGTTCCGC CGCACAGCAT CCCGGTGTCG
CCGGACGCGC AGATCGGGCT GTACCGCAGC CTGGTGGCGG ACCGCAAGAT GTTGATCCTG
CTCGACAACG CGGGCGAGGA GAAGCAGGTG CGGGACCTGC TGCCGGGGAC GCCGGAGTGC
CTGACGATCG TCACCAGTCG CAACCGGCTC ACCGGGTTGA CGGCCAGCCA CGGGGCGGTG
CCGATGCCGC TGTCGGAGTT CACCCCGGAG GAGTCGCGCC GGTTTCTGCG GAGCCGGTTG
GGCGAGGGGC AGCTGGCGGC CGAACCGCAG GCCGCCGACA CGATCATCGC CACCTGCGCC
GGACTGCCGC TGGCGCTGGC CGTGGTGGCG GCGCGGGCGG CCACGATGCC GCAGGTGCAG
CTGGAGCAGT CGGCGGCGGA GTTGCGCGGC GCCACCGGGG ATCTGGAACC GTTCGTGATG
AGCGACGTGT CGACCGACAT CCGGGCGGTG TTCTCGTGGT CCTACCGGCT GCTGGGCGCC
GAGGCCGCGC ACTTCTTCAT CCTGCTGGGC CACCATCCCG GTCCCGACAT CTCCACGGCC
GCCGCCGCGT CGCTGGCGGG GGTGCCGCTG CCGAGGGCGC GGGCGCTGCT GGGTGAACTG
CTGCGGGTGC ACCTGGTGAC CGAGCGCCGT CCGGGCCGGT TCGTGTGCCA CGACCTGCTG
CGCTCCTACG CGTCCGAACT GGACACACTG GCGGAGTGGG AGGGGCTGCG CGAGGGTCTG
CGGCGCGTCG TCGACCACTA CACCCACACC GCCCACGCGG CGGCGCGGCT GGTGCATCCG
ATGCACGACC TGCCGCCCGA GCCATCGCGC TGTCCCGGCG TCACCCCGGA GAAACCCGCC
GACCGGCAGG CCGCGATGGC CTGGCTGCGC ACCGAACACG AGGCGCTGTT GGCCAGTATG
GAGCTGTCGA TCGCCGACGG CTGGGACTCA CGGACGCTGC GGATCGCGGC CGCGATGCTG
ATCTGCCTTG ACCTGCACGG CATGTGGGGC GTCATGGTCG CCACCCAGGA GAAGGCGCTG
GCGGCGGCGC AGCGGCTCGG CGACCCGCGG GCGATCGCCG GGGTGCACCG CGACCTCAGC
CGCGCCTACT CCCGGCTGGG GCGCTTCGAC GAGGCCGAAC AGCGAATAAC CGAGGCGCTG
CGGCAGTTCG AGCAGCTGGG CGACCTGGGC GGGCAGGCGC GGGTCCAGCA CCAGGCGTCG
GTGCTCAACG CGATGCGGGG ACGGCACCGG GAGGCCCTCA CGGCCGCCAC CCGCGCGGTC
GAGCTGGGTG AACTCGCCGG TGACCTGGTC GCGCAGGCCA TCGGGCACAA CGCCATCGGC
TGGCATCTGT CGCAACTGGG CGATCAGTCG GAGGCACTGT CGCACTGCCA GCGGGCGATG
GTGCTGGCCG ACAAGATCGG CTACCAGCAG ATCAAGGGCG GCATCTGGGA CAGCCTGGGC
CATATCCACC GCCGTCGGGG TTGCCTGGAC CAGGCGATGC ACTGCTTCCG GCGGGCCGTG
GACGACGAGC TGGCGATCGG CAACCGGCTG GGGTTCGCCT CCGCGCTGGT CGGGTGCGGG
GACGTCCGGT TCCTGCAGGG CGAGACCGAC GCGGCCCGCG AGACCTGGCA GCGGGCGCTG
TCGATCCTGG AGGCACTGAA GCACCCCGAC GCCGAGCGGG TGCGGGGCCG GCTGGCCGGG
CGGCTCGACC CGTCCGGGGA CTGA
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| Protein sequence | MSLPLGPSSA FESAPKIPMD SHITLPSELR PVLVRLLGPV EIAGEDGWQR GGAPKQACVL
ACLALSPGTA VSIETLAHRV WDGPHPTETR NIIYGHVTRL RQLLKPHDEV RLRRMGTSEY
QLDIEPELVD AWRMRDLAGK ARAVQAGGDM TTAAELWRGA VEQWRGPALA GIKTEWSART
SRRLRNDYLA AAAGWSECLL QLGQHEAVVG NLEPIVEHHP LVENLVAPLL LALYRCGRTM
DALNRYTDTR RQLRKTLGND PGERLRTLYQ RILRQEPELL RAPATERREA APAAVSPAPA
PVPAQLPARV SGFINREAQL ETLDAQLPSA SLVTISGMAG VGKTALAVHW AQRIASRFPD
GQLYVNLRGF DPSGQPTEPA DVIRGFLDAL AVPPHSIPVS PDAQIGLYRS LVADRKMLIL
LDNAGEEKQV RDLLPGTPEC LTIVTSRNRL TGLTASHGAV PMPLSEFTPE ESRRFLRSRL
GEGQLAAEPQ AADTIIATCA GLPLALAVVA ARAATMPQVQ LEQSAAELRG ATGDLEPFVM
SDVSTDIRAV FSWSYRLLGA EAAHFFILLG HHPGPDISTA AAASLAGVPL PRARALLGEL
LRVHLVTERR PGRFVCHDLL RSYASELDTL AEWEGLREGL RRVVDHYTHT AHAAARLVHP
MHDLPPEPSR CPGVTPEKPA DRQAAMAWLR TEHEALLASM ELSIADGWDS RTLRIAAAML
ICLDLHGMWG VMVATQEKAL AAAQRLGDPR AIAGVHRDLS RAYSRLGRFD EAEQRITEAL
RQFEQLGDLG GQARVQHQAS VLNAMRGRHR EALTAATRAV ELGELAGDLV AQAIGHNAIG
WHLSQLGDQS EALSHCQRAM VLADKIGYQQ IKGGIWDSLG HIHRRRGCLD QAMHCFRRAV
DDELAIGNRL GFASALVGCG DVRFLQGETD AARETWQRAL SILEALKHPD AERVRGRLAG
RLDPSGD
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