Gene Snas_0195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0195 
Symbol 
ID8881373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp207765 
End bp208190 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content66% 
IMG OID 
Productaspartate 1-decarboxylase 
Protein accessionYP_003509007 
Protein GI291297729 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0992718 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.129309 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCGAA CCATGCTGAA GTCCAAAATC CACCGTGCCA CCGTCACCCA CGCCGACCTC 
CACTATGTCG GGTCACTCAC CGTGGACGAG AACCTCATGG AGGCCGCCGA CCTCCTTCCC
GGTGAGCAGG TGGCCGTTGT GGACATCACC AACGGTGCCC GGCTGGAGAC CTATGTGATC
CCCGGTCAGC CCGGTACCGG CGTCATCGGG ATCAACGGCG CCGCCGCCCA TCTGGTGAAA
CCGGGTGACC TGGTGATCCT GATCGCGTAC GCGGTCATGG ACGAGGAGCA CTCGCGCGGC
TACGCCCCGA AGATCGTGCA TGTGAACGGC GACAACGAGA TCATCGACCT CGACGTCGAC
CCCGCCGCCG TCGCGCCCGG GGTCGCGGGC GAGCCGCGAC GCAGCCCGCT GGCCAAACCC
GCCTGA
 
Protein sequence
MFRTMLKSKI HRATVTHADL HYVGSLTVDE NLMEAADLLP GEQVAVVDIT NGARLETYVI 
PGQPGTGVIG INGAAAHLVK PGDLVILIAY AVMDEEHSRG YAPKIVHVNG DNEIIDLDVD
PAAVAPGVAG EPRRSPLAKP A