Gene Snas_0179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0179 
Symbol 
ID8881357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp180773 
End bp181945 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content69% 
IMG OID 
Productglycosyl transferase group 1 
Protein accessionYP_003508992 
Protein GI291297714 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTTA CGTTCCTGGT CCACAGCTTG GACCGCGTCG GCGGCATCAC CCGCGCCACC 
CTGACCACCG CCTCCGCCCT GGCGGCGCGC GGTCACGGGG TGCGGATCGC GGCGATATTC
AGGCTCAGTT CCCGTCCACG ATTCGACGTC GATCCCCGGG TGGAGGTGGT GACGCTCGTC
GACGAGGTCG ACGGGAGGCG AAGATCGACG CGCGACAGCG CGCTGCGGAA ACGTCCGTCC
CGCATCCATC CCCGTGGCGA CACCTTCTAC GAGCACGCGT ACACCGAACT GGTGGACGCG
CGGCTCACCG AGTTCCTGAA CGACTGCGAG GCCGACGTGG TGGTGGGTAC CACGCCCGGT
CTCAATGTCT GCCTCGCCGC CCTGGCACCG CGAGGCGCGA TCACCGTCGC GCAGGAGCAC
ATGTTCTACG AACACCACGA GCCCTCACTG CGGGCCGAAC TGTCGCGCGC CTACGAACGC
ATGGACGCGG TGGTCACGCT CACCCAACGG GACGCGGCCC GACATCGCCG GGAACTGCCG
CACCTGGCAT CCCGGGTCAC CCGCATCCCC AACTCGGTAC CGGCGCCACC GCGACGCGCG
CGGCGGCCCG ACAACCGGGT CATCGTGGCG GCCGGACGTC TCGAACCGGC CAAGAACTTC
GCGATGCTGA TCGACGCGTT CGCCATCGTG CACCGTCACC ATCCGGAATG GAGGTTGCGA
GTCGTCGGCG ACGGCTCGCA ACTCGATGGA CTGCGCGCCC AGATCCAGCG ACTCGGCCTG
TCACACCGGG TATCACTGCC CGGCATGATC ACGCCGATGG ACCGGGAGTG GGCCGCCGGC
GGGATCGCGG CGCTGTCGTC CGATTTCGAG TCCTTCGGCC TGACCGTCAT CGAGGCGATG
CACTTCGGAC TCCCCGTGGT GTCCACGCAC TGCCGTTACG GCCCACCGGA GATCATCACC
GACGGCGAGG ACGGTCTACT GTGCCCTGTC GGCGACGCGG AGCGGTTCGG GGCGGCACTG
TGCCGTCTCA TCGAGGACCG GGCGCTGTGG CGACGCTGCT CGCGAACGGC ACGCCGCACC
GCGGGACGCT ACGTCCCCGA GGAAGTGGTC GCCGACTACG AGAAGCTGTT CAACCGCCAG
CTCGAGCACC GCGACCTGTC CACGCTCGGC TGA
 
Protein sequence
MKVTFLVHSL DRVGGITRAT LTTASALAAR GHGVRIAAIF RLSSRPRFDV DPRVEVVTLV 
DEVDGRRRST RDSALRKRPS RIHPRGDTFY EHAYTELVDA RLTEFLNDCE ADVVVGTTPG
LNVCLAALAP RGAITVAQEH MFYEHHEPSL RAELSRAYER MDAVVTLTQR DAARHRRELP
HLASRVTRIP NSVPAPPRRA RRPDNRVIVA AGRLEPAKNF AMLIDAFAIV HRHHPEWRLR
VVGDGSQLDG LRAQIQRLGL SHRVSLPGMI TPMDREWAAG GIAALSSDFE SFGLTVIEAM
HFGLPVVSTH CRYGPPEIIT DGEDGLLCPV GDAERFGAAL CRLIEDRALW RRCSRTARRT
AGRYVPEEVV ADYEKLFNRQ LEHRDLSTLG