Gene Snas_0170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0170 
Symbol 
ID8881347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp172062 
End bp173144 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content69% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003508983 
Protein GI291297705 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACA TCTCGATCCG AAACCTGTCC AGGACCTACT CAGGACAGAA GGCCCCGGCC 
ACCGACGACG TGAGTCTCGA CGTGGCCGAC GGCGAGTTCA TGGTGTTCCT GGGCCCCAGC
GGTTGCGGCA AGACCACCCT GCTGCGCATG ATCGCGGGCC TGGAGTTGCC CGACGCCGGT
TCGGTGGCCA TCGGCGGCAA GGACGTCACC TACCTGGCTC CCCGCAACCG CAACCTGTCG
ATGGTGTTCC AGTCCTACGC GGTGTTCCCG CACCGTCGGG TCCGGGCCAA CATCGGCTTC
GGCCTGAAGA TGCGTGGTGT GGCCGCCGAC GAGATCGCCC GCCGGGTGGA CCGGGCCGCG
GACCTGTTGC AGCTGACCGA TTACCTCGAT CGCTACCCGG CTCAGCTTTC GGGCGGTCAG
CGGCAACGCG TCGCGGTGGC GCGGGCCATC GTCGTCGACG CCGACGTACT GCTCATGGAC
GAACCGCTGT CCAACCTGGA CGCGCTGCTG CGGCTGTCGT TCCGGGCCGA GCTGAAGAAG
ATCGTCGCGG AACTGGGCAC CACCACCGTC TACGTCACCC ACGACCAGGC CGAGGCGCTG
TCGCTGGGCG ACCGGGTCGC GGTGATGCGC TCCGGCCGGA TCGTGCAGCA GGGCGGCCCC
ATCGACGTGT ACGACTCTCC CGCCGACACC TTCGTGGGCG GATTCCTGGG CTCACCACCC
ATGAACTTCC TGGACGGCGA AGTCGCCGAC GGCCCGAAAC TGCGCGTCGG CGAGCAGAGC
CTCGCGGTGC CCAGCGCCCT GGCGTCCTTC GCCGGGCAGC CGGTGAAGCT GGGCGTGCGG
GCCGAGAACA TCACGGTCTC GCAGTCCCGC GACGAATCCG CGGTGCCCGC CACGGTAGAC
GTCGTCGAAC CGGTCGGCGC CTCGGTGCTG CTGACGGTCA CCGTCGACGG CCAGGAACTC
AAGGTCCAGG CACCGCCGAC GTTCCGCATC GACCCCGGGG CCACGGCCTG GCTGACCTTC
CCGGCCGACC GGCTGCGGTT CTACGATCCC GAATCCGCCA TGGCACTGGA GACCGATCGA
TGA
 
Protein sequence
MADISIRNLS RTYSGQKAPA TDDVSLDVAD GEFMVFLGPS GCGKTTLLRM IAGLELPDAG 
SVAIGGKDVT YLAPRNRNLS MVFQSYAVFP HRRVRANIGF GLKMRGVAAD EIARRVDRAA
DLLQLTDYLD RYPAQLSGGQ RQRVAVARAI VVDADVLLMD EPLSNLDALL RLSFRAELKK
IVAELGTTTV YVTHDQAEAL SLGDRVAVMR SGRIVQQGGP IDVYDSPADT FVGGFLGSPP
MNFLDGEVAD GPKLRVGEQS LAVPSALASF AGQPVKLGVR AENITVSQSR DESAVPATVD
VVEPVGASVL LTVTVDGQEL KVQAPPTFRI DPGATAWLTF PADRLRFYDP ESAMALETDR