Gene Snas_0153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0153 
Symbol 
ID8881330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp155871 
End bp157067 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content71% 
IMG OID 
Producthistidine kinase 
Protein accessionYP_003508966 
Protein GI291297688 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.810064 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGTGGC CCCGTTTCAC CGCGCGTGGT CGGTTGACAC TGCTGTACAT GGCGATGGTG 
CTGGGCGCCG GTGCCGTCAT GACGGCGCTG ACCTACGTCC TGATGCGAAG CAGTCTGCGG
CGCCGATCGT TCGTTCACAC CGATGTGGAC CCTGATTCCC CGGCCGGTCT CCCGTTCCCC
GAACGGTTCG ATGAGCTCAT CGAACGTGAC CGGATGACCA TACTGTCGGA TCTGCTGGTC
AAGGCGACGG TGGCGCTGGT CGTGGTGTCG GTACTGGCGG CGGTGCTGGG CTGGTTCGTG
GCGGGCCGGG TGCTGCGGCC GATCCGGCAG ATCTCGGCGG CGTCGCGGCG GCTGTCGGCG
GAGAACCTCG CTGAGCGGGT GCCGGTGCGG GGGCCCGCCG ACGAACTCGC CGAACTGGCG
GACACCGTCA ACGGCATGCT GGACCGCATC CAGCGCGGCG TCGCCGAACG GGACCGGGCG
CTGGCGAGCC AGCGGCTGTT CACCGCCAAC GCCGCCCACG AACTGCGCAC CCCGCTGACG
ACCATGCGCA CCGCCATCGA CGTGACCCTG GACGGCGAAC CCGACCGCGA CGAACTGCTG
GCCATGATCG CCGACCTCGA CACCACCGTC GAACGCAGCC GCCGCACCCT CGACGGCTTG
CTGCTGCTGG CCGGTAGCCA CGCCGCTCCG GCCGAGCAAA GCCCGGTCGC ACTGGACGGA
CTCGTCGCCG AACTGCTCGA GGCGAAGGCC CCGGCGATCG CCGAGCACCG CATCGACGTG
CGACGCGAAC TGTTCCCCGC ACCGGCACTG GGCGACCCGC TGCTGCTGGA ACGGTTGACG
GGCAACCTGA TCGACAACGC CGTCCGGTAC AACCACCCGG ACGGCCACAT CGCGCTGCGC
ACCGGGACCG CTGACGGCAG GGCGTTCCTG CGGGTCGCCA ACTCCGGTCC CCACGTCGCG
CCCGAGTCGG CCCCGGGGCT GCTGGAACCG TTCGTGCGGG GCGGTGGCGG CCGCATCCGT
GCCACCGGCG GCGTCGGGCT GGGTCTGTCC ATCGTCCGGG CCGTCGTCAC CGCCCACGAC
GGCGACCTGT CGATCGCGGC GAACCCGGAC GGCGGCCTGA CCGTCACCGT CGAGCTGGCG
GTCGACCCGG CGGCGGCCAC GCGCACTGAC GGCGGCCGAG ACGACCACGT GGCTTAG
 
Protein sequence
MRWPRFTARG RLTLLYMAMV LGAGAVMTAL TYVLMRSSLR RRSFVHTDVD PDSPAGLPFP 
ERFDELIERD RMTILSDLLV KATVALVVVS VLAAVLGWFV AGRVLRPIRQ ISAASRRLSA
ENLAERVPVR GPADELAELA DTVNGMLDRI QRGVAERDRA LASQRLFTAN AAHELRTPLT
TMRTAIDVTL DGEPDRDELL AMIADLDTTV ERSRRTLDGL LLLAGSHAAP AEQSPVALDG
LVAELLEAKA PAIAEHRIDV RRELFPAPAL GDPLLLERLT GNLIDNAVRY NHPDGHIALR
TGTADGRAFL RVANSGPHVA PESAPGLLEP FVRGGGGRIR ATGGVGLGLS IVRAVVTAHD
GDLSIAANPD GGLTVTVELA VDPAAATRTD GGRDDHVA