Gene Snas_0142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0142 
Symbol 
ID8881319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp145350 
End bp145835 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content62% 
IMG OID 
Producttranscriptional regulator, CarD family 
Protein accessionYP_003508955 
Protein GI291297677 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.432895 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.208842 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTTA GTGTCGGCGA GACCGTTGTT TACCCCCATC ACGGGGCCGC ACTCATCGAA 
GCAGTCGAGA CCCGCACCAT TAAAGGCGTC GAGCAGGAAT ACCTTGTCCT GCGCGTCGAG
CAGGGTGACC TGACGGTGCG GGTTCCAGCC GGAAACGTCG AACTCGTCGG CGTGCGAGAA
GTCGTAGGAG CCGAGGGCCT CACCGAGGTC TTCGACGTTC TGCGCGCCCC GCACACCGAA
GAGCCGACCA ACTGGTCACG ACGGTATAAG GCGAACTTGG AGAAGCTCGC CTCCGGTAAC
CCGCTCAAGG TTGCCGAAGT CGTCCGCGAC CTGTGGCGCC GCGATCGTGA ACGCGGTCTG
TCAGCTGGAG AGAAGCGCAT GCTCACCAAG GCACGCGACA TCCTCGTCGG CGAAGTTGCC
CTCGCCGAGG CCAGCACCAA AGATGACGCC GAGGTCCTGC TGGACAAAGT CCTGGCAGAG
GCTTAA
 
Protein sequence
MSFSVGETVV YPHHGAALIE AVETRTIKGV EQEYLVLRVE QGDLTVRVPA GNVELVGVRE 
VVGAEGLTEV FDVLRAPHTE EPTNWSRRYK ANLEKLASGN PLKVAEVVRD LWRRDRERGL
SAGEKRMLTK ARDILVGEVA LAEASTKDDA EVLLDKVLAE A