Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_0142 |
Symbol | |
ID | 8881319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 145350 |
End bp | 145835 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | transcriptional regulator, CarD family |
Protein accession | YP_003508955 |
Protein GI | 291297677 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.432895 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.208842 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTTTA GTGTCGGCGA GACCGTTGTT TACCCCCATC ACGGGGCCGC ACTCATCGAA GCAGTCGAGA CCCGCACCAT TAAAGGCGTC GAGCAGGAAT ACCTTGTCCT GCGCGTCGAG CAGGGTGACC TGACGGTGCG GGTTCCAGCC GGAAACGTCG AACTCGTCGG CGTGCGAGAA GTCGTAGGAG CCGAGGGCCT CACCGAGGTC TTCGACGTTC TGCGCGCCCC GCACACCGAA GAGCCGACCA ACTGGTCACG ACGGTATAAG GCGAACTTGG AGAAGCTCGC CTCCGGTAAC CCGCTCAAGG TTGCCGAAGT CGTCCGCGAC CTGTGGCGCC GCGATCGTGA ACGCGGTCTG TCAGCTGGAG AGAAGCGCAT GCTCACCAAG GCACGCGACA TCCTCGTCGG CGAAGTTGCC CTCGCCGAGG CCAGCACCAA AGATGACGCC GAGGTCCTGC TGGACAAAGT CCTGGCAGAG GCTTAA
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Protein sequence | MSFSVGETVV YPHHGAALIE AVETRTIKGV EQEYLVLRVE QGDLTVRVPA GNVELVGVRE VVGAEGLTEV FDVLRAPHTE EPTNWSRRYK ANLEKLASGN PLKVAEVVRD LWRRDRERGL SAGEKRMLTK ARDILVGEVA LAEASTKDDA EVLLDKVLAE A
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