Gene Snas_0123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0123 
Symbol 
ID8881300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp130380 
End bp131711 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content70% 
IMG OID 
ProductCarbamoyl-phosphate synthase L chain ATP- binding protein 
Protein accessionYP_003508937 
Protein GI291297659 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.185093 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00258853 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTTCGACA GCCTGCTGAT CGCCAACCGG GGCGAAATCG CCCGGCGCGT CAACCGCACC 
GCCCGCGAAC TCGGAATCCG CACCATCGCG GTCTACTCCG AGGCCGACGC CGACCTGCCC
CACGTCACCG AGGCCAGCGA GGCCGTGCTG CTGGGTCCCG CCGACCCCGC CTCCTCGTAC
CTCAACACCG AGGCGATCCT GGCCGCCGCC AAGAACACCG GCGCCCAGGC CATCCACCCT
GGTTACGGCT TCCTGTCCGA GAAACCCGGC TTCGCCCGCG ACGTCACCGA AGCCGGGATC
GCCTGGATCG GCCCCAGCCC CGAGGCCATC GACGCCATGG GCGACAAGGT CAACGCCCGC
AACCTGATGT CCGCCAACGA CGTACCCGTC GCCCCCGGCG GCGGCGACCC GGTCACCGAC
GCCACCGCGG CCCTGGCCGT CGCCGAGAGC ATCGGCTTCC CGGTCATGGT CAAGGCCGCG
GCCGGTGGCG GCGGCATGGG CATGGCCATC GCCGAAGACG CCAAGGCACT GGAAGAGCAG
GCCGAGAAGA TCCACGGCTT CGCCACCCGG CTGTTCGGCT CCGGCGACCT GCTCATCGAG
CGCTACTTCC CCCGGGTGCG CCACATCGAG GTCCAGATCC TCGGACTGCC CGACGGACGC
GTGCTGGCGC TGGGCGAACG CGAATGCTCG GTGCAGCGCC GCCACCAGAA GCTCGTCGAG
GAGACCCCCT CGCCCGCCCT GACCGACGCC ACCCGGGCCC GGCTGCTGGA AGCCTCCAGC
CGCGCCGGTG AGGCCGTGAA CTACGTCGGC GCTGGAACCG TCGAATACCT CTTCGACGTC
GACAGCGGCG AGTTCTTCTT CCTGGAGATG AACACCCGGC TCCAGGTCGA GCACCCCATC
ACCGAGGCCG TGCTCGGCAT CGACCTGGTC GAGGCCCAGC TGCGGGTCGC CGCCGGCGAG
GAACTGGGCT TCAGCGACCC CAAACCGTCC GGCCACGCCA TCGAACTGCG CGTCAACGCC
GAGGACCCGA AGCGGTTCCT GCCCGGCCCC GGCACCATCG ACACCTGGGT CGAACCCACC
GGCGAGGGCG TGCGCGTCGA CGCCGGATAC CAGGCCGGAC ATACCGTCCC CCGGTTCTAC
GACTCGCTGA TGGCCAAGGT CATCGTGCAC GGCGCCGACC GGGCCCAGGC CATCGAACGC
GCGAAGCGGG CCGTCGACGG ATTCACCATC ACCGGCCCCA AGTCCAACCT GGCGTTCCAC
GCCGAACTGC TGGACAACCC CGAGTTCAAC AGCGGCGACT ACGACACCGG CATCGTGGGG
AGGATGCGAT GA
 
Protein sequence
MFDSLLIANR GEIARRVNRT ARELGIRTIA VYSEADADLP HVTEASEAVL LGPADPASSY 
LNTEAILAAA KNTGAQAIHP GYGFLSEKPG FARDVTEAGI AWIGPSPEAI DAMGDKVNAR
NLMSANDVPV APGGGDPVTD ATAALAVAES IGFPVMVKAA AGGGGMGMAI AEDAKALEEQ
AEKIHGFATR LFGSGDLLIE RYFPRVRHIE VQILGLPDGR VLALGERECS VQRRHQKLVE
ETPSPALTDA TRARLLEASS RAGEAVNYVG AGTVEYLFDV DSGEFFFLEM NTRLQVEHPI
TEAVLGIDLV EAQLRVAAGE ELGFSDPKPS GHAIELRVNA EDPKRFLPGP GTIDTWVEPT
GEGVRVDAGY QAGHTVPRFY DSLMAKVIVH GADRAQAIER AKRAVDGFTI TGPKSNLAFH
AELLDNPEFN SGDYDTGIVG RMR