Gene Snas_0103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0103 
Symbol 
ID8881280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp111438 
End bp111911 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content67% 
IMG OID 
Productalkylhydroperoxidase like protein, AhpD family 
Protein accessionYP_003508917 
Protein GI291297639 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.335572 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCTC GACTGAACGC CTTCGAGAAC CCGGTCCTGG GCAAGGTCTT CAAGCACCTC 
ATCGCGGCCA ACAAATCGCT GGCCGACACC GGCCTGCCGC ACACCACCCA GGAACTGGTC
AAGATCCGCG CCAGCCAGAT CAACAGCTGC GGCTTCTGCA CCGACATGCA CACCAAGGAC
GCCCTGGCCG CCGGTGAGAC CCAACAGCGC CTCAACCTGG TCGCGGCCTG GCGCGAGGCC
ACGGTCTTCA CCGACGCCGA ACGCGCCGCC CTCGAACTCG CCGAGGAGGG CACCCGCATC
GCCGACGCGG CGGGCGGCGT CTCGGAAGAC GTGTGGGCCA ACGCGGCCAA GCACTACGAC
GAGAACCAAC TGGGCGCCCT GGTTTCGCTG ATCGCGCTCA TCAACGCGTT CAACCGCGGC
AACGTCATCA TCCAGCAGCC CGCCGGCGAC TACCAGCCCG GCATGTTCGG GTAG
 
Protein sequence
MNARLNAFEN PVLGKVFKHL IAANKSLADT GLPHTTQELV KIRASQINSC GFCTDMHTKD 
ALAAGETQQR LNLVAAWREA TVFTDAERAA LELAEEGTRI ADAAGGVSED VWANAAKHYD
ENQLGALVSL IALINAFNRG NVIIQQPAGD YQPGMFG