| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_0102 |
|---|
| Symbol | |
|---|
| ID | 8881279 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 110775 |
|---|
| End bp | 111353 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003508916 |
|---|
| Protein GI | 291297638 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.351493 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACCGG GCCTTCGGGA ACGCAAGAAA CAACGCACTC GCGACGCACT AGTGGCCGCC
GCCGTCGACC TCTTCCAACG CCAGGGCTAC GAACACACGA CGGTGGCCCA GATCGCCGAG
GCCGCCGAGC TGTCCACCCG CACCTTCTTC CTCCACTTCC CCACCAAAGA GGACGTTCTG
CTGGCCAACA CCGACCGCCG CATCGCCGCC GGGGTCCAGG CGATCACCAC CCACCGGGCG
AACACCCCGC TGGCCACCGT CCTGCTGACG GCGATGGAGC GCATGATCGA CGACGCCGAC
CCCAGCGACC TCACCCAACT GCGGGCCCAG CTCCTCGTCC GAACCCCCGC CCTCCAGGCC
CGCCTCTTCC AACGCCTCTT CTCCGGCCAA ACCGCCCTCA TCGACGCCCT CACCACCACC
TTCGACGTCG ATCGCGTCGA AGCGGCGGCC CGCGTCGGCG CCATGATCGG CGCGGTCAAC
GCCGCCACCC TCGCCAGCCT CGACCAGGGC GACCCCCCGT CCCGCCAACG CGAAGCGATG
ACCCGAGCCG CCCGCCTCGC CGTCACCCCA CCGGCGTGA
|
|---|
| Protein sequence | MEPGLRERKK QRTRDALVAA AVDLFQRQGY EHTTVAQIAE AAELSTRTFF LHFPTKEDVL
LANTDRRIAA GVQAITTHRA NTPLATVLLT AMERMIDDAD PSDLTQLRAQ LLVRTPALQA
RLFQRLFSGQ TALIDALTTT FDVDRVEAAA RVGAMIGAVN AATLASLDQG DPPSRQREAM
TRAARLAVTP PA
|
|---|
| |