Gene Snas_0081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0081 
Symbol 
ID8881258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp90523 
End bp91290 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content66% 
IMG OID 
Productputative transcriptional acitvator, Baf family 
Protein accessionYP_003508896 
Protein GI291297618 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGTTGT GCGTCGACAT CGGAAACACC AACACCGTGC TCGCCACATT CGAGGGTGAG 
ACGCTCGTCC ACTCCTGGCG CATCAAGACC GACCCGCGCG CCACCGCCGA CGAGATGGCC
CTCACCTTCC GGGGACTGCT CGCGGGCGAC AACGTCGAGG TGAGCGCGAT CTGCGTCAGC
TCAACGGTTC CGCAGGCGCT GCGGGAACTG CGGGTCATGC TGTCGCGCTA CTACGCGGCC
AAACCGACGG TGCTGGTGGC ACCCGGGGTT CGCACCGGGG TTCAGCTGGC CATCGACAAC
CCGCGCGAGG TGGGCGCCGA CCGCATCGTC AACACCCACG CGGCGTACAA CATGTACGGC
GGGCCGTCCA TCATCGTGGA CTTCGGCACC TCGACGAACA TCGACGTGAT CTCCGAGAAG
GGCGAGTTCC TGGGCGGGGC GTTCGCGCCC GGCATCGAGA TCTCGATCGA CGCGCTGGCG
TCGCGGGCCG CGCAGTTGCA GAAGGTCGAG CCGGTCAAGC CGCGTTCGGT GATCGGCAAG
AACACCGTCG AGTGTCTGCA GTCGGGCATC ATCTACGGTT TCGCGGGCCA GATCGACGGC
CTGGTCACCC GGATCATCAA ACAACTGGGC ACCGGGGTGT CGGCGGTCAT CGCGACCGGC
GGCCTGGCGC CGGTGGTGAT CGAGGAGTGC GCGACGATCA CGAACTACGA GCCGATGCTG
ACGTTGATCG GGCTGCGGAT GATCTACGAA CGCAACGCGC CGCAGTAG
 
Protein sequence
MLLCVDIGNT NTVLATFEGE TLVHSWRIKT DPRATADEMA LTFRGLLAGD NVEVSAICVS 
STVPQALREL RVMLSRYYAA KPTVLVAPGV RTGVQLAIDN PREVGADRIV NTHAAYNMYG
GPSIIVDFGT STNIDVISEK GEFLGGAFAP GIEISIDALA SRAAQLQKVE PVKPRSVIGK
NTVECLQSGI IYGFAGQIDG LVTRIIKQLG TGVSAVIATG GLAPVVIEEC ATITNYEPML
TLIGLRMIYE RNAPQ