Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_0080 |
Symbol | |
ID | 8881257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 89655 |
End bp | 90515 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | Poly(3-hydroxybutyrate) depolymerase-like protein |
Protein accession | YP_003508895 |
Protein GI | 291297617 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGGCGA TGCGAACCCT GCGCGGCCTG GCGGTACTGG CGTTGCTGGC CGTTGCCGTC GGCTGCGGTG GCCCCGGCGA GGCCGGGTCA CAGGACAAGG CCGACGACAA GACCGAGACG AAGGCCGACC CCGGCGAGCC CGGCCTCCAC AAGAAGGTCA AGGTCGACGG CGGCAAGACC TACGACGTCT ACGTGCCCAA GGGCCGCTCG CTCGACGAGC CGGTACCGGC GGTGCTGGTG CTGCACGGCA TGCCCGGCGA CGCCGCCGAA GCCCGGGAAC AGTCGGGGCT GGACGCGCTC GCCGACGAGG AGGGCTTCCT GGCCGTCTAC CCCGACAACC CGAACGGCAG CTGGACCCCG AACCCCGACG ACGAGGGCGA CAGCGACTTC GTCCGCGACA TCATCACCGA CCTGACCGGT ACCTGGAACG CCGACCCGAA GCGGATCTTC GTGTCCGGCA CCTCCAACGG CGGCGACATG GCGCTGACCA TCGGCGCGAA GCTGCCGGAT CTGGTCGCGG GGATCGCGGC GGTCGTTCCG GCGGGCACCG AGGAGGTCGC GAAGGTGATG GACGCCGTCG AGACACCGGT GCCGTTGATC GCCTTCTTCG GCGGCAACGA CCCGCGCGAG GGTCTCGGCC TGGACCTGGT GGCCACCTGG CGGGACCGCG TCGAGTGCGG CAAGGCCAAG ACCGACAAGG GAAAGCAGGT CACGGTCCGC GAATACGCGT GCGCCGACGA CACCGCGGTG GTGACGCAGG AGGTGCACGA GGGCTTCCAC GAGTGGTTCG GCACCGCCGC CGAACCCGAA CCGGTGTGGG CTTCGGCGGC GATGTGGGAG TTCTTCACCC GGAAGTCGTG A
|
Protein sequence | MTAMRTLRGL AVLALLAVAV GCGGPGEAGS QDKADDKTET KADPGEPGLH KKVKVDGGKT YDVYVPKGRS LDEPVPAVLV LHGMPGDAAE AREQSGLDAL ADEEGFLAVY PDNPNGSWTP NPDDEGDSDF VRDIITDLTG TWNADPKRIF VSGTSNGGDM ALTIGAKLPD LVAGIAAVVP AGTEEVAKVM DAVETPVPLI AFFGGNDPRE GLGLDLVATW RDRVECGKAK TDKGKQVTVR EYACADDTAV VTQEVHEGFH EWFGTAAEPE PVWASAAMWE FFTRKS
|
| |