Gene Snas_0074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0074 
Symbol 
ID8881250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp83017 
End bp83901 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content72% 
IMG OID 
ProductRNA polymerase sigma-24 subunit, ECF subfamily 
Protein accessionYP_003508889 
Protein GI291297611 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.290235 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAG GCCGCGCGGA GACCGGTCCC GACGCCGCCA CCGATGCGTT CGTGGCGCAC 
CGGAACCTGC TGTTCACGGT GGCCTACGAG CTGCTGGGCT CCGCCGTCGA CGCCGAGGAC
GTGCTCCAGG AGACCTGGCT GCGGTGGGCG GACGTCGACC TCGACACCGT GCGCGACCAC
CGCGCCTACC TGGTCCGCAT CGCCACCCGC CAGGCCCTCA ACCGGCTGCG CACCCTCAGC
CGCCGCAAGG AGTCCTACGT CGGGCCGTGG CTGCCCGAGC CGCTGCTGAC GACACCGGAC
GTCGCCGAGG ACGTCGAACT GGCCGACAGC CTCTCGACGG CGATGCTGCT GGTCCTGGAA
ACCCTCACCC CCACCGAGAG GGCGGTCTTC GTGCTGCGGG ACGTGTTCGC CCTCGACTAC
GACGAGATCG CCGAGGCCGT CGACAAGACC CCCGCGGCGG TCCGCAAGGT CGCCCACCGC
GCCCGCTCCC ACGTCGCCGC CCGCCGCCCC CGGGGCGAGG TGTCGCCCGC CCAGTCCCGG
GCGGCGCTGG AGGCGTTCCG CAGCGCCGTG GCCACCGGCG ACCTCCAGGG CCTGGTCGAC
ATCCTGGCCC CGGACATGGT CATGCTCAGC GACGGCGGCG GCATCGTCAC GGCCCTGCCC
AACCCGATCG TCGGCGCCGA CAAGGTGCTG CGGCTGTTCG CCGCCTCGCT CGACACCTTC
CTGCGGGGCG CGACGCTGGA ACCGGTGCGG GTCAACGGTT TCCCGGCACT GTTGATGCGG
GTCTGCGGGA AACTCGACGG CGTCCTGACA CTGCGGCTCG ACGACGGTCT GGTCTCGGGC
CTGTACTACG TCCGCAATCC TGAGAAACTT TCCCGGGTTC GCTGA
 
Protein sequence
MTAGRAETGP DAATDAFVAH RNLLFTVAYE LLGSAVDAED VLQETWLRWA DVDLDTVRDH 
RAYLVRIATR QALNRLRTLS RRKESYVGPW LPEPLLTTPD VAEDVELADS LSTAMLLVLE
TLTPTERAVF VLRDVFALDY DEIAEAVDKT PAAVRKVAHR ARSHVAARRP RGEVSPAQSR
AALEAFRSAV ATGDLQGLVD ILAPDMVMLS DGGGIVTALP NPIVGADKVL RLFAASLDTF
LRGATLEPVR VNGFPALLMR VCGKLDGVLT LRLDDGLVSG LYYVRNPEKL SRVR