Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_0074 |
Symbol | |
ID | 8881250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 83017 |
End bp | 83901 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | RNA polymerase sigma-24 subunit, ECF subfamily |
Protein accession | YP_003508889 |
Protein GI | 291297611 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.290235 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCAG GCCGCGCGGA GACCGGTCCC GACGCCGCCA CCGATGCGTT CGTGGCGCAC CGGAACCTGC TGTTCACGGT GGCCTACGAG CTGCTGGGCT CCGCCGTCGA CGCCGAGGAC GTGCTCCAGG AGACCTGGCT GCGGTGGGCG GACGTCGACC TCGACACCGT GCGCGACCAC CGCGCCTACC TGGTCCGCAT CGCCACCCGC CAGGCCCTCA ACCGGCTGCG CACCCTCAGC CGCCGCAAGG AGTCCTACGT CGGGCCGTGG CTGCCCGAGC CGCTGCTGAC GACACCGGAC GTCGCCGAGG ACGTCGAACT GGCCGACAGC CTCTCGACGG CGATGCTGCT GGTCCTGGAA ACCCTCACCC CCACCGAGAG GGCGGTCTTC GTGCTGCGGG ACGTGTTCGC CCTCGACTAC GACGAGATCG CCGAGGCCGT CGACAAGACC CCCGCGGCGG TCCGCAAGGT CGCCCACCGC GCCCGCTCCC ACGTCGCCGC CCGCCGCCCC CGGGGCGAGG TGTCGCCCGC CCAGTCCCGG GCGGCGCTGG AGGCGTTCCG CAGCGCCGTG GCCACCGGCG ACCTCCAGGG CCTGGTCGAC ATCCTGGCCC CGGACATGGT CATGCTCAGC GACGGCGGCG GCATCGTCAC GGCCCTGCCC AACCCGATCG TCGGCGCCGA CAAGGTGCTG CGGCTGTTCG CCGCCTCGCT CGACACCTTC CTGCGGGGCG CGACGCTGGA ACCGGTGCGG GTCAACGGTT TCCCGGCACT GTTGATGCGG GTCTGCGGGA AACTCGACGG CGTCCTGACA CTGCGGCTCG ACGACGGTCT GGTCTCGGGC CTGTACTACG TCCGCAATCC TGAGAAACTT TCCCGGGTTC GCTGA
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Protein sequence | MTAGRAETGP DAATDAFVAH RNLLFTVAYE LLGSAVDAED VLQETWLRWA DVDLDTVRDH RAYLVRIATR QALNRLRTLS RRKESYVGPW LPEPLLTTPD VAEDVELADS LSTAMLLVLE TLTPTERAVF VLRDVFALDY DEIAEAVDKT PAAVRKVAHR ARSHVAARRP RGEVSPAQSR AALEAFRSAV ATGDLQGLVD ILAPDMVMLS DGGGIVTALP NPIVGADKVL RLFAASLDTF LRGATLEPVR VNGFPALLMR VCGKLDGVLT LRLDDGLVSG LYYVRNPEKL SRVR
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