| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_0058 |
|---|
| Symbol | |
|---|
| ID | 8881234 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 63972 |
|---|
| End bp | 64622 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003508873 |
|---|
| Protein GI | 291297595 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTGCG AGTCGCGGAC CGACGGTCGA CTGGAACGAG GCAACGCCAA ACGGCGGGCG
ATCCTCGACC GTGCCGTCGA TCTGGCCTCG ATCTCCGGAC TCGACGGCCT GTCCATCGGC
AAACTCGCCG CCGAACTCGG CATCAGCAAG AGCGGCGCCC TGCTCCACTT CGGATCGAAG
TTGGAGCTCC AGCTGGACGT GATCACGCAC GCCGCCGAAC GCTTCGGCCG GGCCGTCATC
GCCCCCGCCG CCGAACAGCC CGTGGGCCTG CCCCGGCTGT GGTACCTGAC CGACGGCTGG
TTGCACCACA TCGAGATCGA GACCTTCCCC GGCGGCTGCT TCTTCTCCAC CGTCGGCGCC
GAGTTCAACT CCCGACCGGG CCGCATCCAC GACGCCCTCG CCAAGATCCA CAACCGGTGG
AGCAACCTGC TGGAGCAACA GGCGGTCGCC GCCCGCGAAG CCGGACAGCT GCGCCCCGAC
GTCGTCGCGG AGCGGCTGGT CTTCGAACTG GACGCGCTTA TCCGGCACGC CAACATGCAC
CGGCAGCTGC ACGACAGCCG CAAGGTGCTC GGCCACGCCC GCGAAGCCGT GCGGGACCTG
TTGACCCGGG TCGGCACCGA GGCGGCGGTG CGCGAGCTGT TCGGCGAGTG A
|
|---|
| Protein sequence | MECESRTDGR LERGNAKRRA ILDRAVDLAS ISGLDGLSIG KLAAELGISK SGALLHFGSK
LELQLDVITH AAERFGRAVI APAAEQPVGL PRLWYLTDGW LHHIEIETFP GGCFFSTVGA
EFNSRPGRIH DALAKIHNRW SNLLEQQAVA AREAGQLRPD VVAERLVFEL DALIRHANMH
RQLHDSRKVL GHAREAVRDL LTRVGTEAAV RELFGE
|
|---|
| |