Gene Snas_0015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0015 
Symbol 
ID8881189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp19648 
End bp21021 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content71% 
IMG OID 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003508831 
Protein GI291297553 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCATA CCCCCGAAAC CTCGACGGGC GAGAAGACCC GGTGGGCGCC GATCGTCGCG 
CTGGCCATGG CGATGGTCGT CATCACCTCC GACATGACGA TCGCGGCGGT GACCCTGCCG
TCGCTGGGCG AGGACATGGA CGTCGGCGCC GCCGCCACCG CGTGGGTGCT GCTGGGCTAC
TCGCTGCCGA TGGCCGCCAT CGCGATCCCG GCCGGGCGCT GGGCCGACCG CGCCGACCTG
CGCGCCGTGT TCGTGCTGTC CATGACCGGC GTCGCGGTGG CCAGCGTCGC GGCCGCGCTG
GCCCCGACGT TCTGGGTACT GGTGGTGGCC CGCCTCCTGC AGGGTTTCAC CGGCGCGCTC
ACCATGTCGG TGTACATGCC GATCGTGGCC GCCGCGGTGA AGACCGAACA GCGCGGCCGT
GCCATCGGCT ACATCATCAC GATCATGACC CTGGGCGGCC TGATCGGCGC GCCACTGGGC
GGACTGGTCG CCGGTGGCCT GGGCTGGCGG GCGGTGTTCC TGCTGAAACT GCCGATCGTC
GCGGTGGCCA TCGTGCTGGC CCTGAAGTCG GTGCCCAGCA ACGGGAAGCG ACTGCCGTTG
CCCGACGCGG CGCTGTGGCG CGACACCCTC GTGGTCGGCG GTGCGGTCGG CTCACTGCTG
CTGGCTTTCG ACCGGATCGA GCGGCAGCCG CTGGCCGCCA CCGGCCTGAT CGCGCTGGCC
GTGGTGCTGG CGGTGCTGTG GCTGCGGTTC CGCAGCTCCC GTCCCATGGT GGCGGTCCTG
GGACGCCGCG TCCTGGGCCT GCCGATGCTG GGCCTGTTCC TGATGAGCTT CATGATCGGG
CTGATCTCGT TCCTACTGCC GTACTACTTC ACCGACGAAC TGAACACCGG TCCCGAGGCG
ATGGGGGTGG CGATGCTGTT CTTCAGCGGA GCGATGGCCC CGATCTCACC ACTGGCCGGA
GGGCTCGCCG ACCGCTTCGG AGCGCTGCGC ATCGCCTCGG CGGGCGCGGT GGTGTCGATC
CTCGGTCTGG GCAGCATGCT CACCCTCGGC CCCGACTCGT CCATGGTGGA CGTGATCTGG
CGACTGGTGC TGCTCGGTGT CGGCGCCGCC CTGTTCAACG GACCCATCAA CGCCGCCCTC
ATGGCCGCGA CCCCCGCCGA CATGCTCGGC ACCGCGGGCG GAATGTTCGC CACCACCCGA
ACGCTGGCCT CCACCATCGG CCCGGCGGTG ACGGCGTTCG TGTGGTCGAC GGCGGGCGGC
GGCATGCCCG GCTTCACGAC CGCGACAGCG GTGCTGACCG CGCTGTCGGT GCTGGGACTG
GGCTTCGTGC TGGCGGGCCG ATCACGGCAA CCGGCGCTGG CCACCGCGGC TTAA
 
Protein sequence
MTHTPETSTG EKTRWAPIVA LAMAMVVITS DMTIAAVTLP SLGEDMDVGA AATAWVLLGY 
SLPMAAIAIP AGRWADRADL RAVFVLSMTG VAVASVAAAL APTFWVLVVA RLLQGFTGAL
TMSVYMPIVA AAVKTEQRGR AIGYIITIMT LGGLIGAPLG GLVAGGLGWR AVFLLKLPIV
AVAIVLALKS VPSNGKRLPL PDAALWRDTL VVGGAVGSLL LAFDRIERQP LAATGLIALA
VVLAVLWLRF RSSRPMVAVL GRRVLGLPML GLFLMSFMIG LISFLLPYYF TDELNTGPEA
MGVAMLFFSG AMAPISPLAG GLADRFGALR IASAGAVVSI LGLGSMLTLG PDSSMVDVIW
RLVLLGVGAA LFNGPINAAL MAATPADMLG TAGGMFATTR TLASTIGPAV TAFVWSTAGG
GMPGFTTATA VLTALSVLGL GFVLAGRSRQ PALATAA