| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_0012 |
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| Symbol | |
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| ID | 8881186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 14936 |
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| End bp | 17722 |
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| Gene Length | 2787 bp |
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| Protein Length | 928 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003508828 |
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| Protein GI | 291297550 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.111668 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGCCA CGCGATCACG GCCGGAGACT TCCGGTCCCG AAGCGGATAC GGTTTCGCAC
ATGCTGTTCG GACGCACCCA GGAGACGGCT CACATCGAGC GACTGCTCGA CGAGGCCCGG
CAGGGGCGCA GTCAGGCCCT GATCGTCCGG GGCGAGGCCG GGATCGGCAA GTCCGCGCTG
CTGGGCCACG CCCTGACCGC CGCCGACGAC TTCCGGCAGC TGCGGGCCAT CGGCATCGAG
GCCGAATCCG AACTGCCCTA CGCCCACCTC CACATGCTGC TGCACCCGGT GCTGCACCGC
ATCGACGCGC TGCCCAAGCG GCAGGCCTCC GCGCTGCGCG GCAGCCTCGG CCTGTCCGAC
GAGACCAGCG GCGACCGGTT CATGATCGGC CTTGCGGTGC TGACGCTGCT GGCCGAGATC
GCCGACGAGG GCCCCGTCCT GTGCGTTGTG GACGATGCCC ACTGGATCGA CCGGGAATCG
GCCGACGCGC TCCTGTTCGC CGCCCGCAGG CTGGAGGCCG AAGGCGTCGT CGTCCTGTTC
GGCGCCCGTG ACCAGCACGC GCCCGCCTTC CCCTCCCACG GCATCGCCGA ACTCGACCTC
TCCAATCTGG ACGACGAAGC CGCCGCCCAG CTGCTGGCCG AGTACGCCTC CGACCTGTCC
GAACCCGCCC GCCGCCAGGT CATCGCCGAG GCCGTCGGCA ACCCGCTGGC ACTGCGGGAA
CTGCCGGTGG CGCAACGGGA AGGCCAGCTC ACCCTCGACC CGTACCGGGT CTCGGCGCTG
CCCACCCACA GCCGGATCCA GCGCACCTTC GCCGACCGGA TCGCCACCCT GCCCGACAGC
ACCCGCACCC TGCTGCTGGT GGCCGCCGCC CACGGTTCCT GCGACGCCCC ACCGATCCTC
GCCGCCGCCA CCAAGCTCGG CTCCACCATG GAGGACCTGG AACTCGCCGA ACGCAAACAA
CTGCTGTCCA TGGTGGATGG CCACCTGTGC TTCCGGCACC CGCTGGTCCG CTCGGCCACC
TACCAGGAGG CCTCCACCGC CGAACGCATC ACCGTCCACA CCGCCCTGGC CGAGGCCATC
ACCTCACCCG CCCACGCCGA ACGCCGAGCC TGGCACCTGG CCGCCGCCGC CACCGGCCCC
GACGAGAAGA TCGCCGCCGC CCTCGAAGAG GTGGCCTGCG CCGGTCAGGC CCGCGGCGGT
CGCAACGCCG TCGCCTCGGC CTACGAACGC TCCGCCCAGC TGAGCCCCGA CCCCGACGAG
AAGGCCCGCC GGTTCCAGGC CGCCGCGGCG GCAGCCCTGG CCGCCGGACA ACTCGACCGC
GCCGACGCGC TGGCCGCCGA AGCCGCCAGC AACACCACCG ACCCGAAACT GCTGGGCAGG
CTCGCCCACA TCAACGCCCA TGTCGCCTAT GGACACGGCA ACACGATGGC CTCGTACCAC
GGCTGGGTGT CCGCGGCCCG CGAAGTGGCG CCACACGCGA ACCTCCAGGC CAGCTACATG
CTCTTCCACG CCGTGGAAGC GGCCTGGATG GCCGGGAACT TCGCCGCCGT CGACGAGGTC
GCCGAGCTGG CCACGTCCAT GAAGCTGCGC AACGCCCCCA GGGTGCTGGC CATGGCCCGG
GTCGCGCACG GACTCGGCGA CCGGCACGGC GATGTCGCCG ACGGCGTCGC CGCGCTGCGC
GAGCTCATCG CCACCACCGG CCGCAGCCAC GAGCCGACCC TGCAGGACCG CGCCACCATC
GCGTGGTGGC ACCTGCTGCT GGGCGACCAC ACCACCGCCC TGGACCTGAC CGCCTCGCTG
GTGGCGGACT GCCGCGCGAC CGGGGCGATG GGCGTGCTGC CCAGGGCACT GGCCCTGCAA
GCCAAGGCGC AGCTGTACTC CGGCCACCAC CGCGACGCCG CCGCCAGCGC CACCGAGGCA
CTGCGCACCG CCGAGGAGTC CGGCAACCAG CCGATCATGA TCGGCGTCCC GCTGAGCACC
CTGGCCTACC TGGCCGCCAT CGGCGGCGAC GAGAAACGCT GCCTGGAACT GCTGTCCAAG
CTGCCCGGCG CCGACGACGG CCGCGGCATC CTGCTGCTGG ACGGCGCCCT GGGCGTCCTG
GACCTGACCC TGGGCCGCAA CGAAAGCACC GTCGACCGGC TCGCCGAACT GGCGAACCGC
CGCAACCGCA TGGACATGCT GCCCACCGTC ACCGACCTCG TCGAGGCCGC GTCCCGTTCC
GGCCAACCCG AACGCGCCCG CGAACCCTTC GGCTGGTTCA CCGCGTTCGC CGAGCACATC
GACCAGCCGT GGGCGATGGC CCTCGTCGAA CGCGGCCGGG CCCTGCTGGG ACCCGACGCC
GAGGCCGAAC AACACTTCAT CCGTGCCGTC GAGTTCCACA ACCAGCCCGG CGACCGCCCC
TTCGAACGCG CCCGCACCGA ACTGCTCTAC GGCGAATGGC TGCGCCGCTC CCGCCGCCGC
TCCGACGCCC GCGGCCACCT GCGTTCCGCT TTGGACACCT TCGAGCGCCT CGGCGTCACC
CCGTGGGCTG AACGGGCCCG CACCGAACTG CGCGCCGCCG GTGACAGCCA GGGCCCCGCC
GCCCTCCGCC CCGAAGCCCT CTCCCAACTG ACCCCACAGG AACTCCAGGT GGTCCGGCTG
GCCGCCACCG GCATGACCAA CCGCGACATC GGCGCCCAGC TGTTCCTCAG TCCCCGCACC
GTCGGCTACC ACCTCTACAA GGCCTACCCC AAGCTCAACA TCGCCAGCCG TGGCGAACTG
GCCACACTAG ACCTGCAAGC CGCCTGA
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| Protein sequence | MLATRSRPET SGPEADTVSH MLFGRTQETA HIERLLDEAR QGRSQALIVR GEAGIGKSAL
LGHALTAADD FRQLRAIGIE AESELPYAHL HMLLHPVLHR IDALPKRQAS ALRGSLGLSD
ETSGDRFMIG LAVLTLLAEI ADEGPVLCVV DDAHWIDRES ADALLFAARR LEAEGVVVLF
GARDQHAPAF PSHGIAELDL SNLDDEAAAQ LLAEYASDLS EPARRQVIAE AVGNPLALRE
LPVAQREGQL TLDPYRVSAL PTHSRIQRTF ADRIATLPDS TRTLLLVAAA HGSCDAPPIL
AAATKLGSTM EDLELAERKQ LLSMVDGHLC FRHPLVRSAT YQEASTAERI TVHTALAEAI
TSPAHAERRA WHLAAAATGP DEKIAAALEE VACAGQARGG RNAVASAYER SAQLSPDPDE
KARRFQAAAA AALAAGQLDR ADALAAEAAS NTTDPKLLGR LAHINAHVAY GHGNTMASYH
GWVSAAREVA PHANLQASYM LFHAVEAAWM AGNFAAVDEV AELATSMKLR NAPRVLAMAR
VAHGLGDRHG DVADGVAALR ELIATTGRSH EPTLQDRATI AWWHLLLGDH TTALDLTASL
VADCRATGAM GVLPRALALQ AKAQLYSGHH RDAAASATEA LRTAEESGNQ PIMIGVPLST
LAYLAAIGGD EKRCLELLSK LPGADDGRGI LLLDGALGVL DLTLGRNEST VDRLAELANR
RNRMDMLPTV TDLVEAASRS GQPERAREPF GWFTAFAEHI DQPWAMALVE RGRALLGPDA
EAEQHFIRAV EFHNQPGDRP FERARTELLY GEWLRRSRRR SDARGHLRSA LDTFERLGVT
PWAERARTEL RAAGDSQGPA ALRPEALSQL TPQELQVVRL AATGMTNRDI GAQLFLSPRT
VGYHLYKAYP KLNIASRGEL ATLDLQAA
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