Gene Snas_0009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0009 
Symbol 
ID8881183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp11687 
End bp12403 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content60% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003508825 
Protein GI291297547 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.394336 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGACA AAGCATCCGA GTTCATCACC CTGATGACCG CCGTCAAGGA ACTTCTCAAC 
GAGGCTGGCC AGCAGTCCAA CTCGGCAGCG GGAATCGCCG ATGAGGCCGC GGAATTGTTC
GCGCAAGGTG GAAACGCCAA TAGCCACACC ATGATGACTC AGGCCGCTGA GTCGGCGCGC
AAGGTCCTCA CTCAGGTGGC CGGACTCGTC AGCACCACTG ACGAAGCAAT CGCCCAAGCT
CAGCAAGCCA AGGGCAATTT ACACACCTCT TCTTCCGGGA GCTCCGGTGT CCGTGAACCC
GTCGCGAAGA TCGGCGACCC GATCGAGGCG CCGCAAGGCG GTCCTGACGA CACCAGTGAC
CATCGTGCCG AACTGAAATC CGCGGACGAC GATGATGAGG AAATGACTCG TGCCGACCGC
GCCTTGCGTG TGATGGCGCG AAACGCCGGG GACGTTGAGA CAGTTACGAA AGACATCGTG
CAAACCGCGT CCAGCATGTT CCGGACGTAT AAAGAGGACA AGCCTGGGTC TGGCCAACCC
TCGCGAATGG CCACAGGGCA AAGCGAGGCC CAGACTCAGG TTCCCCAGCC GAAAATCTCG
AGTGACACTC CCCAAGGCCC GTCATTCGAA GGCATGGCCG TGGCCACCGT TCTCGGTGGT
GTCGCGGCCA TTCAAGGAAT CAAAGCTCTC CGCAGTCGAC AACCGAAGGA GAAGTAG
 
Protein sequence
MSDKASEFIT LMTAVKELLN EAGQQSNSAA GIADEAAELF AQGGNANSHT MMTQAAESAR 
KVLTQVAGLV STTDEAIAQA QQAKGNLHTS SSGSSGVREP VAKIGDPIEA PQGGPDDTSD
HRAELKSADD DDEEMTRADR ALRVMARNAG DVETVTKDIV QTASSMFRTY KEDKPGSGQP
SRMATGQSEA QTQVPQPKIS SDTPQGPSFE GMAVATVLGG VAAIQGIKAL RSRQPKEK