Gene Snas_0005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0005 
Symbol 
ID8881178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5491 
End bp5895 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003508821 
Protein GI291297543 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.918474 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.25905 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCATATG AACCACGGCG CAAACGGCGT CGCCCGACCG GAGCCTGGTC GGGCCCCGGG 
CCCGACGGCC GCGATCCGCA GCCGCTCGGC GAGGTGCTGG GCAAACTCAT CAAGGACCGG
GGTTGGCGCG ATCCGGCGGC CAAGGCCGGG CTGTTCGCGA ACTGGCCCCA GATCGTCGGC
CCCGAGATCG CGGAGCACTG CCGTCCGGTG TCGTGCGCGG ACGGCGAGCT GATCATCGAG
GCCGAGTCGG CGGCGTGGGC CACCCAGCTG CGGCTGTTCA AGACCCAGAT CCTGGCCCGG
CTGGCCTCGC ACTCGGGGCC GCAGGTGGTC ACTCGGCTGC GGATCCAGGG ACCGTCGCAG
CCGTCCTACG TCACCGGGCC CCGGCGGGTG CGGTTTCGAT CATGA
 
Protein sequence
MSYEPRRKRR RPTGAWSGPG PDGRDPQPLG EVLGKLIKDR GWRDPAAKAG LFANWPQIVG 
PEIAEHCRPV SCADGELIIE AESAAWATQL RLFKTQILAR LASHSGPQVV TRLRIQGPSQ
PSYVTGPRRV RFRS