Gene Snas_0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0004 
Symbol 
ID8881177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4365 
End bp5501 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content72% 
IMG OID 
ProductDNA replication and repair protein RecF 
Protein accessionYP_003508820 
Protein GI291297542 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.332828 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.294433 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCATGTTC GGCGGCTGGA GCTGACCGAC TTCCGTTCCT ACGGTCACGT CGACGTCGAA 
CTGCCCGAAG GCCCGAGCGT CTTCGTCGGC CCCAACGGGC ACGGCAAGAC CAACCTGATC
GAATCGCTGG GCTACCTGGC CACCGGTTCC AGTCACCGGG TCACCTCGGA CGCGCCGCTG
GTGCGCGCGG GGTGCGAGTC GGCGACCGCC CGCGCCGCGA TCGTCCATGA AGGACGCGAG
CTGCTGGCCG AGCTGACCAT CACCCCCGGC AAGGCCAACC GGGCCCGGCT CAACCGCTCC
CCGCTGCCGC GGTCCCGCGA CCTGATCGGG GCGCTCAAGG CGGTCGTGTT CGCGCCCGAG
GACCTCAACC TGATCCGCGG CGAACCCGAA CAGCGGCGCC GGTTGCTGGA CGAACTGCTC
ATCGCCCGGC ACCCGCGGTT CGCCGGGGTG CGCGCCGACT ACGACCGGGT CGTCAAGCAG
CGCAACGCCC TGCTGCGGAC CGCGTACTTG GCCCGCAAGA CCGGCGGCCG GGGCAACACC
GACCTGCACA CTTTGGACAC CTGGGACGCG CACCTGGCCC AGCACGGCGC CGACCTGCTG
GCCGGGCGGC TGGCCCTCAT CGAGGACTAC ACCCCCTACG TGGTCAAGGC GTACGAGGCC
GTCAGCGCCG GACGCGGGCG GCCGAGGCTC AGCTATCACA GCGCCCTGGG CGAGAACGAA
CCGTTGTCCC CCGACCGGGA CCTGCTGACC GCCCGGCTGT CGGCCGCGCT GGCCACCGCC
CGCAGCCGCG AGGTGGAACG CGGCACCACC CTGGTGGGCC CGCACCGCGA CGACCTGAAA
CTCGTGCTCG GCGACCTGCC CGCCAAGGGC TACGCCAGCC ACGGCGAGTC CTGGTCCTAC
GCGCTGGCAC TGCGGCTGGG CGCGGCGGAA CTGCTGCGCG ACAACGGGAC CGCGCCGGTG
CTCATCCTCG ACGACGTCTA CGCCGAGTTG GACTCGCAGC GGCGGGAACG ACTGGCCGAA
CTCGTCGCCA GGGCGCCGCA GGTGCTGGTG ACCTGCGCGG TGGCCGAGGA CGTGCCCGCG
CAGATGAGCG GCGGCCGCTA TGACATTCAC GACGGGGAGG TAAGGCGTGT CATATGA
 
Protein sequence
MHVRRLELTD FRSYGHVDVE LPEGPSVFVG PNGHGKTNLI ESLGYLATGS SHRVTSDAPL 
VRAGCESATA RAAIVHEGRE LLAELTITPG KANRARLNRS PLPRSRDLIG ALKAVVFAPE
DLNLIRGEPE QRRRLLDELL IARHPRFAGV RADYDRVVKQ RNALLRTAYL ARKTGGRGNT
DLHTLDTWDA HLAQHGADLL AGRLALIEDY TPYVVKAYEA VSAGRGRPRL SYHSALGENE
PLSPDRDLLT ARLSAALATA RSREVERGTT LVGPHRDDLK LVLGDLPAKG YASHGESWSY
ALALRLGAAE LLRDNGTAPV LILDDVYAEL DSQRRERLAE LVARAPQVLV TCAVAEDVPA
QMSGGRYDIH DGEVRRVI